Physcomitrium patens (spreading earthmoss): 112285923
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Entry
112285923 CDS
T01041
Name
(RefSeq) ubiquitin domain-containing protein DSK2a isoform X1
KO
K04523
ubiquilin
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112285923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112285923
03051 Proteasome [BR:
ppp03051
]
112285923
Membrane trafficking [BR:
ppp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
112285923
Proteasome [BR:
ppp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112285923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
UBA_NBR1_C
STI1-HOP_DP
XPC-binding
Dsc3_N
UBA_HOIP
UBA_7
Motif
Other DBs
NCBI-GeneID:
112285923
NCBI-ProteinID:
XP_024383077
UniProt:
A0A2K1K637
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Position
8:2114210..2119020
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AA seq
549 aa
AA seq
DB search
MGEGPDGAAKAGADAGASSVRDAGGSIAVVHVRCSNGNKFTVEVDLSATVMAMKVLLVER
SEIPADQQRLIYKGRVLKDDSTLNSYGLQSDHTVHLVRGAAPAPAAGTPTLTSTPTPAVA
QANPVGLGSVAGLGGMGFPGIGLGSGGGAFPPFGTGASDFQQVQQQLMQNPNLMREMMNM
PVVQNLMNNPDLMRSLIMSNPQMREIIDRNPDLAHILNDPGTLRQTLDAARNPELMREMM
RNTDRAMSNIEASPEGFNMLRRMYENVQEPLLNAATMSGEVGNGVAPNPFAALVGMNGAA
QGQGQGAANNTGAGTTVPNTAPLPNPWNPTPAGTGTRAAQTPPAVPAAIPGGGFPDFSRL
AGLGLPDLGTMGGSGGLMDPAMIQQMLQNPQIQEMMQGILSNPAYMNQIMNMQPQLRAML
NQNPHFRDMMQNPDFIRQMINPESLQQLMQLQQAMMGQRGGQLPGQFGQPGGGLGGAPNM
NMDALHNMLGGLDSTAPSNPDMPPEELYVTQLRQLREMGFDNTQDNIQALRAAGGNVHAA
VDRLLGNIG
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagggcccgatggcgcagcgaaagcgggggcggacgcgggggctagtagtgtg
agagatgcgggtggtagtatcgctgtggtgcatgtgcgctgctcgaatggcaacaagttc
acagtggaggtggatttgagcgccaccgtgatggccatgaaggtgttgctggtggagcgg
tcggagattccggcggaccagcagcggttgatttacaagggccgggtgcttaaggacgac
agtaccctcaacagctacggtctgcaaagtgatcacactgttcatttggtcagaggagca
gcacctgcacctgccgccggcacccctactctaacatcaacgcctacacctgctgttgct
caagcaaaccctgttggactagggtcagttgcagggttaggcggtatgggtttccctggt
ataggattgggctcgggtggtggcgcttttccgccattcggaacgggagcttcagatttt
cagcaggttcagcagcagctaatgcaaaacccaaacttaatgagagaaatgatgaatatg
cctgtagttcagaacttaatgaacaaccctgatctcatgcgatccttgattatgagcaat
ccacagatgagggaaatcattgaccgtaatccagatttggcccatattttgaacgatcct
ggaacacttcggcagacgttagatgctgctcgcaaccctgagctcatgcgtgaaatgatg
agaaacacagatcgggccatgagtaatatcgaagcttcgcccgaggggtttaacatgctc
aggcgtatgtatgaaaatgtccaagagcctctattgaatgccgcaactatgagtggggag
gtagggaacggcgtggcgccgaacccatttgcagctcttgtgggaatgaacggggctgcg
cagggtcaaggtcaaggtgcagctaataacactggagctggaacaacagtgccgaacact
gctcctttaccgaatccttggaatcctacaccagctgggactggaactcgagctgctcag
acacccccagcggttccagcagcaattccagggggaggttttccagatttcagtaggttg
gcaggacttggccttccagatcttgggacgatgggcggttctggggggctcatggatccc
gccatgatacagcaaatgttgcaaaatcctcaaatacaggagatgatgcagggaatctta
tctaatcctgcttacatgaatcagataatgaatatgcagcctcaactacgtgcaatgctg
aaccagaatccgcattttagagacatgatgcagaatccagacttcattcgacaaatgatc
aatccggagagtttacagcaactaatgcaactccagcaagctatgatgggccaacgtggt
ggtcaattgcctggccaatttggtcaacctggtggtggattgggtggagctccaaacatg
aatatggatgctttacataatatgctcggaggacttgacagcactgccccttctaaccct
gacatgcctcccgaggaactatacgttacacagctaaggcaattgcgtgagatgggattc
gataatactcaagacaacattcaagctctccgtgctgctggtggaaatgtacatgctgca
gttgatcggcttttagggaatattggataa
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