Physcomitrium patens (spreading earthmoss): 112285964
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Entry
112285964 CDS
T01041
Name
(RefSeq) peroxisomal ATPase PEX1
KO
K13338
peroxin-1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112285964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112285964
Membrane trafficking [BR:
ppp04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
112285964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
AAA_22
RuvB_N
NPHP3_N
AAA_18
AAA_5
AAA_33
AAA_14
nSTAND3
AAA_11
NACHT
AAA_25
RNA_helicase
IstB_IS21
AAA_28
TIP49
KTI12
Motif
Other DBs
NCBI-GeneID:
112285964
NCBI-ProteinID:
XP_024383159
LinkDB
All DBs
Position
8:complement(13570463..13578315)
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AA seq
1162 aa
AA seq
DB search
MEVEVRRVGKQDCFASLPIPLLEAFLSEQMPSFPVVLELRLPGKKGRGGPWFVAWDGSAS
RTSHIEVSEKFADCIGLENGTRVIVRARAEVAVADTVAIEPASEDDWEMLELNAEFLEEH
LITRVGVLYEGQRFPVWIESGSVLLLQASTTSPSKLVRLEAGAELIVAPKKRQVSTSSND
VKVSAENGKLDRASVWTGHAWLRVQELHPSLVQSVHVGELVCFSDPTTAMFLCPLTAKKL
RLSHGQLVTLSEFSVKTRLHNLQSGEQESVFPTEADGFELGNGRVKVKTAGRRVVVRAVV
TDLAKPGHIMLAQSLQTYLGLSCHARIGIHSCGDPSASMPALLEFFPAVFEETEENGDES
LQVNKSRVHVGRKVERVLGRWSNHKEFLASVGESQRENGIHRLSHNEDVKNSEETQRSVT
GLLHAWLVAQAAVFSCDAPSQLEKYVPVSGTTIVHLRPSQQSVRIKDSESRGTHRALKSS
VKQDQKDLLFLIGFQNHSNDGSSPTQALSNAATLDESNLYIMLESQMFLDEQEPFSRKAS
GTVSDSKRILPVKVGSFETISCRSLSNCYETCGPTLFSLRWLGESLEKAFFRVKLLLSPT
ITRNCFDFTGTVLLHGPPACGKTTVALALARELQADPSVLAHRVIVRCNKLVGEQASSIR
NLLQDAVSEALDHAPALVILDDLDALLPKEEGPEPATAVMALAEFLGDLMDLYQGGKQGM
KIAFLATARSPMAIPDSLCLSGRFDYHVDLPTPAASERATILEEAVAARGFLCSSSVASE
VAMSFDGADRSDLDVLVDRAAHAAAARFLSPGATNESITEWLLNQSLSSRREKFELFSMD
FKAAQHDFVPSAMQGIAKGGDQAGRSGWDDVGGLLETRRALQEVLELPVKYGSMFKGAPL
RLRSGVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDVFAKAAA
AAPALLFFDEFDAIAPKRGHDNTGVTDRVVNQLLTELDGVEALNGVFVFAATSRPDLLDA
ALLRPGRLDRMLLCDFPTTSERAEILHVLSRKLSFAEDVDLDTVAAITDGFSAADLQAVC
SDAQLESVHTFLANREGTAPVDSTAKPLITMQHLQTAARNARPSVPEAERRKLNDIYASF
METRRTTPSKSQENKGKRATLA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggaggtgaggagggttgggaagcaggattgctttgcatcgctgcccatcccg
ctgctggaagcgtttctgtctgaacaaatgccgtcgtttcctgtcgtgctcgagcttcgt
cttccggggaagaaaggtcgaggtgggccgtggtttgtggcatgggatggttcagcttct
cggacttcgcacatcgaggtttcagaaaaattcgcagactgcattggtctggagaatggc
acacgggttatcgttcgagctagggccgaggttgctgttgctgacacagtcgccatcgaa
cctgcaagtgaagatgactgggaaatgctggagcttaatgctgagtttctagaggagcac
ttgattactagggtaggagtattatacgaaggacagcgattccccgtgtggattgaaagc
ggcagtgttttgttgcttcaagcctccactacaagtcctagcaagctggtacgattagaa
gctggtgctgagctaattgttgctccgaagaagcgacaggtgtcaacatcgtcgaatgat
gtcaaggtttctgccgagaacggtaaattagacagggcctcagtgtggacaggacatgct
tggctccgggttcaggagctgcacccttctttagtgcaatccgttcatgtgggggaattg
gtctgctttagcgaccccacgactgccatgttcttgtgccctttgactgcgaaaaaatta
agactttcacatggacagcttgttacgttgtccgagttttcagtgaagaccaggttacat
aatttgcaaagtggagagcaggagagtgtttttcccaccgaggcggatggttttgagctt
ggtaatggaagagtcaaagtgaaaactgcgggaaggagggtggttgtaagagcggtggtt
acagatttagccaaaccggggcatattatgctggcccagtcacttcaaacttacttgggt
ctcagctgccatgcaagaattggtatccattcatgcggagatcccagtgcttcaatgcct
gcattgcttgagttctttccagcagtatttgaggaaacagaagagaatggtgatgaatca
ctccaggtgaataaaagccgtgtgcatgtgggtagaaaggtagagcgcgtgttagggaga
tggagcaaccacaaagaatttttagcgtcggtgggtgagagtcagagagaaaatggaatc
catcgcttgagccataatgaagatgtgaaaaattctgaggaaactcaacgatccgtgaca
ggattgctccatgcttggctggtcgcacaggcagctgttttcagctgtgatgcaccttcc
caacttgagaagtatgtaccagtctcaggaacaactatagttcatctcagaccttctcaa
cagtccgtaaggataaaagactcagagagcagaggtactcacagggcgttgaaaagttct
gtcaagcaggaccaaaaagatctactctttttgattgggtttcaaaatcattctaacgat
ggatcatctccaactcaagctctatcaaacgcagccactcttgatgaatcgaacctttat
attatgttggagtcgcagatgtttttagatgaacaagaacctttcagcagaaaagcgtca
ggaacagtttctgatagtaaacgcatattgcccgtcaaagttggcagtttcgaaactatt
tcctgtaggagtctatccaactgctatgaaacttgtgggcccaccctattttcgctgagg
tggttaggcgaatcactggaaaaggccttttttcgagtgaaattacttctatcgcctacc
atcacgaggaactgttttgactttactggaactgttcttctgcatggaccacctgcctgt
ggaaagactacggtagctttagcattggctcgggagctgcaagcagacccaagtgtactt
gcgcacagggtgattgtaaggtgcaacaagctagtcggggaacaggctagctcaatccgg
aatttgctacaagatgctgtgtcagaagccctggatcatgcgccagctttggttattttg
gatgatctagacgccctacttccaaaagaagaaggtccggagccagctacagcagtaatg
gctttagcagagtttctcggtgatcttatggatctataccagggaggcaagcaaggaatg
aagatagcatttctcgccactgctaggtcacctatggctatcccggattcattgtgctta
tcaggaagatttgattatcacgtagatttgcccacaccggcagcatcagagagggcaacg
atcttagaggaggctgtagctgctcgtggttttttatgttcgtcatcagtagcatctgaa
gtcgcaatgagctttgatggggctgacagaagtgatctggacgtgttggtggatagagct
gcacatgcggcagcggctcgcttcctttctccaggagctacgaatgaatccatcacagaa
tggctactaaaccaatctctgtcgtcgaggagggagaaattcgaacttttctcgatggac
ttcaaagcagctcagcacgattttgtcccttcagcgatgcaaggtattgcaaaaggtggg
gatcaagctggaagatctggatgggatgacgtgggtggtctcttggagacacgtcgtgct
ttacaagaggtattggagctgccagtaaaatatggaagtatgtttaaaggggctccactc
aggctgcgctctggcgttcttctttatggtccacctgggtgtggtaaaacccacattgta
ggggctgctgccgcggcatgcagtcttcgttttatttctgtcaagggccctgagttattg
aacaagtacattggggcctctgagcaagcggttcgtgacgtctttgcgaaggcagcagca
gccgccccggcactgcttttctttgatgaatttgatgccatcgctccgaagcgaggccat
gacaacaccggagtgacagaccgtgtcgttaatcaactcctgacggaacttgatggcgtg
gaggctctcaatggcgtctttgtgtttgcagcaaccagtcgaccagatttactggacgca
gctttactccgacctggtaggttggatcggatgttattatgcgacttccccactacttct
gagcgcgctgagatacttcatgtcctctccagaaagttatcttttgcagaggatgtggac
ttggacacagtggctgctataacggacggattcagtgctgctgatctgcaagccgtctgt
tcagatgcgcaactggagtctgtccatactttcttagcaaacagggagggaacagctccg
gtggattcaacagcaaaaccgctcatcacaatgcaacacttacaaactgctgctcggaat
gcaaggccttcagtacctgaggctgagaggcggaagttaaatgatatttatgcatccttt
atggaaacgaggaggacaacgccatcaaagtcacaggaaaacaaaggtaagcgtgccact
ttggcataa
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