Physcomitrium patens (spreading earthmoss): 112285974
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Entry
112285974 CDS
T01041
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A
KO
K12856
pre-mRNA-processing factor 8
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112285974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112285974
Spliceosome [BR:
ppp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
112285974
Complex C
U5 SnRNP specific factors
112285974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
112285974
NCBI-ProteinID:
XP_024383173
UniProt:
A0A2K1K8N6
LinkDB
All DBs
Position
8:complement(17504108..17512445)
Genome browser
AA seq
2335 aa
AA seq
DB search
MMDPQAPPMAPPPPASASTAADAEARLDEKARKWHQLNAKRYGEKRKFGFVETQKEDMPP
EHVRKIIRDHGDMSSKKYRHDKRVYLGALKFVPHAVYKLLENMPMPWEQVRDVRVLYHIT
GAITFVDEIPWVVEPIFLAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLL
DVEPLEPIQLELDEEEDSAVYEWFYDYKPLVKTKLINGPSYRRWHLSLPIMAALHRLAGQ
LLSDLIDRNYFYLFDMESFFTAKALNLCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLII
RSPLRTEYRIAFPHLYNNRPRKVKLGVYHTPMVMYIKSEDPDLPAFYFDPLIHPIAFYKT
DKRGERKGFQEEEDEDDFVLPEGVEPLIQDIPQYTDTTAAGIALLFAPRPFNMRSGRMRR
AEDIPLVSDWYKEHCPPTYPVKVRVSYQKLLKCYVLNELHHRPPKGQKKKYLFRSLRATK
FFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREILRLTKLVVDANIQFRLGNVDAYQLADGLQYTFSHVGQLTGMYRYKYRLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGVVPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLT
RLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLI
LALERLKESYSVAVRLNQQQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGIN
NLQDIWDTSEGQCVVMLQTKFEKFFDKIDLTMLNRLLRLVLDHNIADYVTAKNNVVLSYK
DMSHTNSYGLLQGLQFASFVVQYYGLVLDLLVLGLTRASEIAGPPQMPNEFITFWDVKVE
TRHPIRLYSRYIDKVHILFRFTHEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRSVFWDIKNRLPRSITTLEWENSFVSVYSKDNPNLLFSMCGFEVRILPKI
RMTQEAFGSKDGVWNLQNEQTKERTAMAYLRVDDEHLKVFENRVRQILMSSGSTTFTKIV
NKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPK
EIGGLGMLSMGHILIPQSDLRYSQQTDVGVTHFRSGMSHEDEQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVLDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFAAYKWPMSKPSLVAEPKDVFDQKASNKYWIDVQLRWGDYDSHDIERYT
RAKFLDYTTDNMSIYPAPTGVMIGLDLAYNLHAAFGNWFPGSKPLFAQAINKIMKANPAL
YVLRERVRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIY
DDWLKTISSYTAFSRLILILRALHVNNEKAKMLLKPDKTVVTEPHHIWPNLSDDQWMKVE
VALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLT
AVTTKTTNVHGDDLIVTTTSPYEQAAFGSKTDWRVRAISATNLHLRVNHIYVNSDDIKES
GYTYIMPKNVLKKFICIADLRTQIAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQQVHLP
SSLPEHEFLNELEPLGWLHTQPNELPQLSPQDLTSHARVLENNKQWDGEKCIILTCSFTP
GSCSLTAYKLTPTGYEWGRANKDSGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNGPWN
YNFMGVKHSVGMKYGIKLSIPREFYHEDHRPTHFLEFSNLEENDVAEGDREDVFQ
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atgatggacccgcaggcgccaccgatggcgccaccaccgccggcatccgcttcaactgca
gctgatgctgaggcgcggttggatgagaaggccaggaagtggcaccagttgaatgctaag
cgatacggcgagaagcgcaagtttggttttgtggagacgcagaaggaagatatgcctcca
gagcacgtacgcaagattatcagggaccatggtgacatgtcttcgaagaagtaccgtcat
gataagcgggtgtatttgggagctttaaagtttgtgcctcatgccgtgtataagctgttg
gagaacatgccaatgccatgggagcaggttcgagatgttagggtgctctatcacattact
ggtgccatcacattcgttgatgagattccgtgggtagtggaacctatttttcttgctcaa
tggggtactatgtggatcatgatgaggcgagagaagagggacagacgccactttaagcgt
atgcgtttccctcctttcgacgatgaggaaccccctttggattacgctgataacctgctg
gatgttgagcccctcgaacctattcagctagagcttgacgaagaagaagactccgctgta
tatgaatggttctatgattacaagcctcttgtgaagacaaagttgatcaatggacccagt
tacaggcgttggcatctgtcattacctatcatggccgctcttcaccgtcttgctgggcag
ctgctgagtgacttgatagatagaaactacttctatctgtttgatatggagtcatttttc
actgccaaggcactcaatctgtgcatcccaggtggtcccaagttcgagcctttataccgg
gatatggagaagggagatgaagattggaatgagttcaatgatatcaataagcttattatt
cgctctccattgcgtacggaatacaggattgcgtttcctcacttatataataatcgccct
cgcaaagtgaagctgggcgtatatcacactcctatggttatgtacatcaagtcggaagat
ccagatttgcctgcattttattttgatccattgatccatccaattgctttctacaaaaca
gacaagcgtggcgagaggaaaggatttcaggaagaagaagatgaagacgatttcgtcttg
ccagaaggagtggagcctttgattcaggatattccacaatacactgacactactgctgca
ggaattgctttgttatttgctccccgccctttcaacatgcggtcaggtcggatgaggcgt
gctgaggacatccccctagtgtctgattggtacaaagagcactgtcctccgacctaccca
gtgaaggttcgtgtaagttatcaaaagctcttaaagtgttatgtgctgaatgagcttcat
catcggccgccgaagggtcaaaagaagaaatatttattccgttcgttgcgtgcaaccaag
ttcttccagacgacagaattggactgggccgaagcaggtttacaagtatgtaagcaaggt
tataatatgttgaatcttctgattcacagaaagaatctcaactatctgcatttagattac
aattttaatctcaagcctgtgaagactctaacaactaaggagaggaagaagtcccgtttt
ggaaatgcattccatctttgccgggagattttacgcctcaccaagctggttgtggacgca
aatatccaatttcgattaggaaatgttgacgcttaccaacttgcagatggcctacaatat
acattctcgcatgttggtcaattgactggtatgtatcgttacaaatataggctaatgaga
cagattcgaatgtgcaaggatttgaagcatttgatctattaccggttcaataccggacct
gttggtaagggccctggctgtggattctgggcacccatgtggcgcgtttggttgttcttc
cttagaggtgtcgtccctctcttggagagatggttgggaaatctccttgcccgacaattt
gaaggtcgtcattccaaaggagttgctaagactgttactaagcaacgggtggagagccat
tttgacttggaacttagggcagcagtcatgcacgatgtcttagatgctatgccagaaggt
atcaagcagaataaggctcgtaccattcttcagcatctgagtgaagcttggcgttgctgg
aaggccaacattccctggaaagttcctgggctcccagtgccaattgagaacatgattctg
cgctacgtgaagtcgaaggcggattggtggactaatgtcgctcattacaaccgagagcga
attcggcgaggtgccacagtggacaaaactgtttgccggaagaatctcggtcgtctaact
cgtctttggttgaaggcagaacaagagcgtcagcataattatctgaaggatgggccttat
gtcacacctgaggaagcggtggctatttataccacaaccgtacattggcttgaatcccgc
aagttttctcccattccttttcctcccctttcatacaagcatgacacgaagctccttatc
cttgccttggagcgtcttaaagagtcttacagtgtagcagttcgtttgaatcagcagcaa
agggaggagcttgggctgatagagcaggcttatgataatccacatgaggccctgtctcgt
attaagcggcacttgcttacacaaagagccttcaaggaggtcggaatcgagttcatggat
ctctatagccatctcattcctgtatatgagattgagccattggaaaagatcactgatgcc
taccttgatcagtatttatggtatgagggagataaaagacacttgttccccaattggatc
aagcctgctgactcggaacctcctcccttgctggtttacaagtggtgccaaggtatcaac
aatttgcaggacatatgggacaccagtgaagggcagtgcgttgttatgttgcagaccaag
ttcgagaagttcttcgacaaaattgatttgacgatgctgaacagacttctacggttggtc
cttgaccataacattgctgactatgtaacggcaaagaacaacgtggttctatcttacaag
gacatgagtcatacgaattcctacgggctacttcaggggcttcagtttgcctcctttgtt
gtccagtattatgggctggtgctggatctgctagtgttgggtctcacacgtgctagtgaa
atagcgggacctccgcaaatgccaaacgagttcataactttctgggacgtgaaggtggag
actcgtcatcccatccgcctatattcgcgttacatagacaaagttcacatactcttccgt
ttcactcatgaagaagccagagaccttattcagcgttacctgactgaacatccagatccg
aacaatgagaacattgtgggttataacaataagaagtgctggcccagagatgctcgtatg
cgtctcatgaagcacgatgtaaaccttggaagaagtgtgttctgggacattaagaaccgg
cttcctcgcagcatcactactttggaatgggagaactcttttgtttcagtctatagcaaa
gacaatccgaacttgctgtttagcatgtgtgggtttgaagttcgcatcttgccaaagatc
cggatgactcaagaagctttcggcagcaaagatggtgtatggaacttgcagaacgagcaa
accaaggagcgaactgctatggcttatcttcgcgtggacgatgaacacttgaaagtcttt
gagaatcgagtcagacagattcttatgtcatctggctctaccacattcaccaagattgtg
aacaagtggaacactgctcttattggtctgatgacgtacttcagggaagctacagttcat
acccaagagcttctcgatcttcttgtcaaatgtgaaaacaagatccaaactcgtatcaag
attggattgaattctaaaatgcctagtagatttcctccagtgatcttttacactcctaag
gagattggtggtcttggaatgctgtcaatggggcatattttgattccccagagtgacttg
agatacagtcagcagacagacgttggagtcactcactttcgaagtggtatgagtcatgaa
gatgagcaattgattcccaatctttaccggtacattcaaccttgggaaagtgagttcatc
gactcgcagcgtgtgtgggcggagtacgctttgaagagacaagaggctcaggctcagaac
aggagactgactttggaggatcttgaggattcttgggacaggggtataccacgtatcaac
actttgtttcagaaggatcgtcatactttggcttacgataagggttggcgtgtgcgtacc
gacttcaagcagtaccaagtattgaagcagaatcctttctggtggactcatcaacggcac
gatggtaagttgtggaacttaaacaactaccgtacggatgttattcaggctcttggtggt
gttgaaggcattttggagcacactttgtttaagggaacatatttccctacgtgggaaggt
cttttctgggaaaaggcatcaggtttcgaagaatccatgaagtacaagaagctcacaaat
gctcagcgctctggtttgaaccaaattccaaaccgtcgttttacactttggtggtcccct
accattaatcgagccaacgtgtatgttggtttccaagtgcagcttgatcttacaggtatt
ttcatgcatggaaagattccgaccttgaagatttccctcattcagatctttagagctcat
ttgtggcaaaaggtgcacgaaagtgtggtgatggatctttgccaggtcctggatcaagag
ctcgatgctttggagattgaaacagtgcaaaaggaaactattcacccgcgtaagagttat
aaaatgaacagctcttgtgcggatattctgttgttcgctgcttacaagtggcccatgagc
aagccaagtcttgttgcagagccgaaggatgtttttgatcagaaggctagtaacaagtac
tggattgatgtgcaattgcggtggggtgattacgattctcatgatattgaacgttacacc
cgagccaaattcttggattatacaactgataacatgtcaatatatccagctcctacaggc
gtgatgatcgggctggacttagcgtacaatctacacgctgcgtttggcaattggttccct
ggttctaagcctctttttgcacaggctatcaacaaaatcatgaaggctaatcccgcactt
tatgtgttaagggagcgtgtaaggaaggggttgcagctgtattcatctgagcccactgag
ccttatttatcttcccagaattacggagagcttttcagcaaccagatcatctggtttgta
gacgatactaatgtgtatcgcgtgacaattcacaagactttcgaaggaaacttgaccaca
aaacctattaatggtgccatttttatcttcaatccaagaacaggacaactgtttttgaag
gtcattcatactagtgtgtgggcaggacagaaacgtttgggacaattggcgaagtggaag
actgctgaagaagtagctgctttggtccgttctctcccagttgaagaacagcctaagcag
attattgttacgcggaaaggaatgcttgatcctttggaggttcaccttcttgatttcccg
aatatcgtcatcaagggcagtgaattgcagttgccattccaagcttgtctgaagattgag
aaatttggagatttaattctgaaagcaacggagccgcaaatggttttgttcaacatctat
gatgactggctgaagactatatcatcttataccgcattctctaggctcatcttgattctt
cgagctcttcacgtcaacaatgagaaggctaagatgttgctgaagcctgacaagactgta
gtgacagagccacaccacatctggcctaatctgagtgatgatcagtggatgaaggtcgaa
gttgctttgagagatctgatattatcggactacgcgaagaagaataacgttaatacgtct
gcattgacacagtcagagattcgggacatcattttgggtgctgaaattacgcctccctca
caacaacggcagcagattgctgagatcgagaaacaggcgaaggaggctagtcaattgacc
gcagttacaacaaagacaactaacgtacacggagatgatttgattgtaacaactaccagt
ccttatgaacaagcagcctttggttccaagacagactggcgagtgagagctatctctgct
accaatctccatctgcgtgtcaaccacatttatgtgaactcagatgacatcaaggagtcg
ggatacacatacattatgccgaagaatgtattgaagaagtttatatgtattgctgatttg
aggactcaaattgctgggtatttgtacggagtgagtcctcctgataatccacaggttaag
gagattcggtgcattgtaatgcctcctcaatggggcacacatcagcaggtccaccttcct
agtagtctacctgagcatgagttcttaaatgagcttgaacctcttggttggcttcatacc
cagccgaatgagcttccgcagctctcacctcaggacttgaccagtcatgctcgtgttctg
gagaacaacaagcagtgggatggtgaaaagtgcatcatcttaacctgcagtttcactcct
ggttcttgctcattaacagcttataagctgacaccaactgggtatgaatggggtcgggct
aataaggacagtggcagcaatccccacggttatctgccaactcactacgagaaagtgcag
atgctgctgagtgaccgattccttggattctacatggtcccagataacggtccgtggaat
tataatttcatgggtgtgaaacattctgttggtatgaagtatggaatcaagctctccatt
ccaagagaattttatcatgaagatcacaggccgacacactttttggagttcagcaatctg
gaggaaaacgatgttgcggagggggatcgtgaagatgtgtttcagtag
DBGET
integrated database retrieval system
