Physcomitrium patens (spreading earthmoss): 112286102
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Entry
112286102 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K28174
GARP family transcription factor, KAN subfamily
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppp03000
]
112286102
Transcription factors [BR:
ppp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
112286102
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
DUF4337
Motif
Other DBs
NCBI-GeneID:
112286102
NCBI-ProteinID:
XP_024383450
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Position
8:5361702..5367847
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AA seq
542 aa
AA seq
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MQGQVDYSSGSDGGQPGQKWGDNNSGKRHSSSSGEYTPERSSESQNASGESPRSGYQGGF
SGGTGRSGGTVRQYVRSKMPRLRWTPDLHRCFVTAVERLGGQDKSFGAGATPKLVLQLMD
VKGLTIAHVKSHLQMYRSMKNDENGQSGLVQADQMMEYHGTSDTTLLHSSFGLQRNDHFQ
GQALHVRDSDVTSVPIFPNYLHRQAGILQQFDHHPVVTSRHDGHGEWTNRAFVPSGLPSG
HRDWSENKIQLVEWRKREESLAKSSHMAGNSFSNQSRIDMHEDEWPTRPSHSVTLDWERK
RQQPDSIEGRFAAFQEGPWLQPGAIIPTMASSQQLEALKKQQEKASEWDRWQAQGARQDL
PKQSSRHNASEERTSTSLDSRMLFKQLLEPSRSSSNVQEMQHRAREDEVSHRTPGWPVMF
GTENQRGFEKYAERSRHAFTEDQADTSSPWTFSQRSEQAITSTQFNEVHDREPDSTLSLY
PFSSHLTQSSLSPSKPRQSMSLPDINEDHHDFPSSLGLSETLQLSSSQGVTLDLTMSLGA
PG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcagggccaagtggattacagcagtggcagtgatggagggcagccaggtcagaagtgg
ggcgacaataattcgggtaagcggcactcgtcatccagtggagagtacactccagaacgc
tcttccgagagtcagaacgcgtccggggagagcccccgcagtggatatcaaggagggttc
agcggcggtaccgggcggagtgggggaacagtgaggcaatatgtgcgttcgaaaatgcct
cgattgcgctggactccagacctgcaccgctgctttgtgacggctgtggagcggcttgga
ggccaagacaaatcatttggcgcaggagcgacaccgaagctggttcttcaattgatggat
gtcaaaggactcactattgctcacgtcaaaagccacctgcagatgtaccggagcatgaag
aacgacgagaacggacaaagtggattggtgcaagcagatcagatgatggaatatcatggc
acctctgacacaactttactgcactcatccttcgggcttcagcgcaacgatcatttccaa
gggcaagctctgcacgtcagagattccgatgtgacaagtgtacctatattcccaaattat
cttcatcgtcaggctggaattcttcaacaatttgaccatcatcctgtcgtgacttccagg
cacgatggacatggagaatggaccaaccgggctttcgtaccatctggacttccttctgga
catcgagattggtcagaaaacaagattcaactcgtggagtggagaaagagagaagagagt
ttggcaaagagttctcatatggcagggaattcgttcagtaatcaatccagaattgacatg
catgaagatgaatggccaacaagaccgtcacattcggtcactctagactgggaaagaaaa
cgtcaacagcctgatagtattgaaggaagatttgctgcatttcaagaaggcccttggttg
caaccaggagctattatcccaaccatggcttcttctcagcaattagaagccctgaaaaag
cagcaggaaaaggcaagtgagtgggaccgatggcaagctcagggagcacgacaagacttg
ccaaagcaatctagccgacacaacgcatcggaggaacgcacttcgacatcgctagattct
cgcatgctgttcaagcagctactagagcctagccgcagctcctctaacgttcaagaaatg
cagcaccgcgcgcgcgaggacgaggtctcgcatcggacgccggggtggcctgttatgttc
ggaactgaaaaccagaggggatttgagaagtatgcggaaagaagtcgacatgcatttaca
gaagatcaagcagacacatcaagtccatggactttcagtcagcgctctgaacaggccata
acatcaacccaatttaacgaagttcacgacagggagcccgatagtaccctctcactgtac
ccgttcagctcccacttgacgcagagttccttatctccatcgaagcctcgacaatcgatg
agcttaccggacattaacgaagaccatcacgactttcccagctcattaggcctgagcgag
actctacagctgtcgtcatcgcagggtgtcaccttagatctcactatgtctctaggtgct
ccaggttag
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