Physcomitrium patens (spreading earthmoss): 112286115
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Entry
112286115 CDS
T01041
Name
(RefSeq) autophagy-related protein 3 isoform X1
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112286115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112286115
04121 Ubiquitin system [BR:
ppp04121
]
112286115
03029 Mitochondrial biogenesis [BR:
ppp03029
]
112286115
Membrane trafficking [BR:
ppp04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
112286115
Ubiquitin system [BR:
ppp04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
112286115
Mitochondrial biogenesis [BR:
ppp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112286115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
112286115
NCBI-ProteinID:
XP_024383483
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Position
8:7603022..7607498
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AA seq
314 aa
AA seq
DB search
MVLSQRLHEAFKGAVERMTSPRTVSAFKEKGVLTPDEFILAGDNLVSKCPTWSWEMGDPN
KRKPYLPAEKQFLITRNVPCLRRASSIEEDYNAAGGEVLLDNDDDEGWLATHGIDRVFGW
GWLENKTEDEIVPSMDTQESSVKRNFKPLIPQDDEDEDILDMDDVGDDNLVETDDSTLQP
YLVAHEPEDDHILKTRTYDISITYDKYYQTPRVWLTGYDETRYLLQPELVLEDVSQDHAR
KTVTIEDHPHMPGKHASIHPCRHGAVMKKIIDILLSRGVNPEVDKYLFIFLKFVASVIPT
IEYDYTMDFELGGQ
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggttttgtcacagcgcctccatgaggcttttaaaggcgctgtagaaaggatgacaagt
cctcgcactgtctctgcctttaaggagaagggtgtactcactcccgatgaattcattcta
gcaggagacaatcttgtttccaagtgtcccacttggtcttgggaaatgggcgacccgaac
aagcggaaaccgtatcttcccgccgagaagcagtttcttatcactcgcaatgtaccatgc
ttgcgcagggcttcgtccattgaagaagattataacgccgctggcggagaagtgttacta
gacaatgatgatgatgagggttggcttgccacgcacggaattgacagagtttttggatgg
ggttggctagaaaacaagacagaggatgaaattgtgccatctatggacactcaagaaagt
tctgtgaagcggaacttcaaaccattgattcctcaagatgatgaagatgaggacatttta
gatatggatgatgttggagatgacaatttggtggagacagatgatagcacattacaaccg
taccttgtagctcacgagccggaggatgatcacattttgaagacccggacttatgacatt
agtatcacatacgacaagtactatcaaacgcctcgcgtgtggctaaccggttatgatgag
acccgttatttgcttcaaccagaacttgtgttggaggacgttagtcaagaccatgcacgc
aagacggtgacgattgaagatcatccacatatgccaggaaagcatgcatccatccatcct
tgcaggcatggtgcagttatgaagaaaatcattgacatactcctttcccgtggtgttaat
cctgaagtagacaaatatcttttcattttcctcaaattcgtcgcgtccgtgataccaact
attgagtacgattacacgatggactttgaacttgggggtcagtga
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