Physcomitrium patens (spreading earthmoss): 112286147
Help
Entry
112286147 CDS
T01041
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112286147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppp03021
]
112286147
03036 Chromosome and associated proteins [BR:
ppp03036
]
112286147
Transcription machinery [BR:
ppp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112286147
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112286147
PBAF complex
112286147
GBAF(ncBAF) complex
112286147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
112286147
NCBI-ProteinID:
XP_073391680
LinkDB
All DBs
Position
8:4009190..4012110
Genome browser
AA seq
487 aa
AA seq
DB search
MQGGASSSGGAVSLGQQVRQMGAPSGGGGNGGGGGGGGGGGGGGGVGTPPTGSGGGSNAK
RGRGRPMGANNAGGNTSSAFKVADVSPAARRKKQKVADKQIPDKVAALLPESAIYTQLVE
FEARVDAALARKKLDIQEVVRSPPPVERVLRMYVFNTYANQTPNPNSSFQQHYVEPPSWT
LRIMGRVLEGDDVEANGNGSKPANSSLPKFSSFFKRITIQLDPVHYPENNMIVWDSARAS
NHVEGFEIKRRGNVDCDVNIWLEMDHTPERFKLSPALAQVLGVEVDTRPHVIAAVWQYIK
TKKLQNPVDPTMINCDDALQKVFDDEKIKFASISARLHQHMNPPQPIQLYHRIKVSGSMP
AGNACYDVNVNIPAPLLKEMNQFLTNIEKHRDIDLYDDMIANTIRKINEHRRRRAYFLGF
SNSPVDFINGLIASQSRDLKMVVGQNSRNAEKERRSDFYNQPWVEDAVIRYLNRRPAKGS
EGPGNNS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcggagcatcgtcgagtggcggggctgtgtctttgggtcagcaggttagacag
atgggagcgccctcgggagggggtgggaatgggggtggaggaggcggaggaggcggagga
ggaggaggagggggtgtggggacgcctccgacgggtagtggaggtgggtcgaatgcgaag
cggggcagggggaggcccatgggagcgaacaatgcgggtgggaacacgtcgtctgcgttt
aaggtagcggatgtgtcccccgccgcgaggcggaagaagcagaaagtggcggacaagcag
attcctgataaggtcgctgctctgttgcccgaatctgctatttacacccagctcgtggag
tttgaggcgcgcgtggacgcggcgctggctaggaaaaagcttgacattcaggaggttgtg
cgatcgccgccccctgtggagcgcgttttgagaatgtatgttttcaatacgtatgctaat
cagactccgaaccctaattcttcatttcagcagcattatgtggagccgccgtcatggacg
ctgaggattatggggcgtgttctggagggcgatgatgtggaggctaatgggaatggctcg
aaaccggcgaactcttcgttgccgaaattctcgtcgtttttcaagaggataactattcaa
ttggacccggtgcattacccggaaaacaatatgattgtatgggatagtgctagggcttcc
aatcatgttgagggttttgagattaagaggcggggaaatgtcgactgtgatgttaacata
tggttggaaatggatcataccccggaaaggtttaagttgtcacctgctctagctcaagta
cttggcgtcgaggtggatacgcggccacatgttatagctgctgtgtggcaatatatcaag
actaagaaactccagaatccagtggatccgaccatgatcaactgcgacgatgcattacaa
aaagtctttgatgatgagaagataaaatttgcgtcgatatctgcaagactacaccagcac
atgaatccaccacaacccatacagttgtaccacagaatcaaggtgtcagggagtatgcca
gcgggtaacgcgtgttatgatgtgaacgttaacataccggcgcctctgcttaaagaaatg
aatcagtttctgaccaacattgagaagcacagggatattgatctatatgacgacatgata
gcaaacactatacggaagattaacgagcatcgccggcgtcgagcttactttcttgggttc
agtaattctccggtggattttatcaacggtttgattgcctctcaaagccgggaccttaaa
atggtcgttgggcagaatagtcggaacgcggagaaggagcgaagatccgatttttacaat
cagccatgggtggaagatgcagtaattcggtacttgaatcgacgaccggccaagggctcg
gaaggtccggggaacaattcatga
DBGET
integrated database retrieval system
