Physcomitrium patens (spreading earthmoss): 112286155
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Entry
112286155 CDS
T01041
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1 isoform X1
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112286155
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112286155
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
112286155
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112286155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT_EZ
HEAT_2
HEAT_EF3_N
HEAT
TOR1L1_N
HEAT_ECM29
Htt_N-HEAT_1
mTOR_dom
Adaptin_N
GNC1_N
Cnd1
HEAT_DAAF5
HrcA_DNA-bdg
Imm49
Xpo1
Motif
Other DBs
NCBI-GeneID:
112286155
NCBI-ProteinID:
XP_024383560
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All DBs
Position
8:1670240..1682152
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AA seq
1238 aa
AA seq
DB search
MASLAVGLILEKIASKDKDFRYMATSDLLNELQKDSFKLDTDTERKVSQIVLQQLDDASG
DISGLAVKCLAPLVKKVHEGRVVEIVESLCQKLLTGKEQQRDTASIALKTVVADIPSGNV
AQSVVVYLTPKLIKGITNSDTSTEVKSECLDILCDVLHRFGSLMTIDHEKLVKALLMQLN
LPRAGLRKRAIQCLATLATTMSDDLLAKATANVVQILKNKDVKPDMIRTNIQMIGAFCRA
VGYRFGPHLNEVVPLLFCYCNNASENDDELRENSLQALESFILRCPRDVAPHTDLILDLG
LKYLSYDPNFTDDMDEDQAEDMDGEEDEDEESADEYSDDEDMSWKVRRAAAKCVSAVISS
RPEMLATLYVEASPKLIERFKEREENVKIDVYNAFIDLLRQTGNVTKGSGGLANPSSSPL
HILQQEVPKVIKSLNKQLREKSLKTKVGAFSVLKELVMVLPNSLSEHMGSLVPGIEKALN
DKTSNSNLKIEALVFTRLIMASHSPTVFHPHIKALSEPVLAAVGERYYKVTAEALRVCGE
LVKAIRPNFDNPPAFNFVPFVQPIYNAIFKRLTAQDQDQEVKECAISCMGLVTSILGDHL
KKELNTCLPLLLERLRNEITRLTAVKAFATIAESPLSIDLSPVLEQVVTELTTFLRKANR
TLRQASLCTLNSLLTAYSNKISPASYKSIVIELSSLISDADLHMTALTLELCCTMMVDEK
HHSNAGAAIRERVLPQALVLVKSSLLQGQALQTLQAFFAALVLSTNTSFDSLLEALLSTA
RTASPGGPASKQAFHSTAQCAAVLCLAAGEKMCSQTVSMLLTTLRSSDGTDAAQLLSLLC
LGEIGRRRDLSSHSNIEGVVIRSFQSPSEEIKAAASYALGNIAVGNLAQYLPFILSQIDR
QAKLQYLLLHSLKEVISRQAMDGEAKGNMDLQDADVQKILSLLFTHCESEEEGVRNVVAE
CLGKLALIEPEKLVPALKERTASPSAYTRATVVIAIKYTIVERPQPIDSYVKSCISSFLL
LIKDVDRHVRRAAVSALSTAAHNKPALVKELLPTLLPLLYDQTVVKKELIRTVDLGPFKH
IVDDGLELRKGAFECVDTLLDSCLDQINPSFFITPHLLSGLADHYDVKMPCHLILSKLAA
KCGGAVLAVMDALVEPLEKTIQHKTKPDAVKQEVDRNEDMIRSALRAIDSLNRISGEPTP
RFKAFMNHVVKVGSLGEKYNVVRHESDTLGAGDIMDLN
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtcttgcagtaggcctgattttagagaagattgcctcaaaagataaggatttt
cggtatatggctacatctgacctgctcaacgagcttcaaaaagatagtttcaaattagat
acggatactgaacgtaaagtgtcacaaatagttcttcagcaactggatgatgcatctgga
gacatatcaggacttgctgtcaagtgcttagcgcctttggtgaaaaaggtccacgaaggt
agagttgtggagatagtggaatccctgtgccagaagcttctgactggaaaagagcaacag
cgggacactgccagtatagcactgaagacagtagtggctgacatccccagtggaaatgtc
gcacagtccgttgtcgtctacctgacccctaagctgatcaagggcataacaaattcggac
acaagcacagaggtgaagagtgagtgcctggacatcttgtgtgatgtactccatcgtttt
ggaagtcttatgactatagatcatgagaagctggtgaaggcacttctcatgcaactcaat
ttgccacgtgctggcctgcgaaagcgtgctatccagtgtcttgcgactctggctacaacc
atgtctgacgaccttctcgcaaaagcaacggctaacgttgtccagatattgaagaacaaa
gatgtgaaaccagatatgattcgtacaaatatccaaatgattggggcattctgccgtgca
gttggttataggtttggtccacatttaaatgaagttgtcccactccttttttgctattgc
aacaatgcatcagagaacgatgatgaactacgggagaacagcttgcaggcgttggaaagt
tttattttacgatgccccagagatgttgcgcctcataccgacttgattttagacctgggg
ctgaaatatttgagttacgatcccaattttacggatgacatggatgaagaccaggctgaa
gatatggatggcgaagaagatgaagatgaagaaagcgcggacgagtacagtgatgatgaa
gatatgagttggaaagtacgaagagctgcagcgaaatgcgtgtcagcagtgatctcttca
cgacccgagatgcttgccacgctttatgttgaagccagtccaaagttgatcgagcgtttc
aaggagagggaggaaaatgttaagattgatgtctataatgcattcattgatcttcttcgg
caaacgggaaatgtcaccaaaggctctggaggtcttgccaatccatctagcagccctttg
catattctgcaacaggaagtgcctaaggtcatcaagtctctgaacaaacagctccgtgaa
aaatctttgaagacaaaggtgggggcgttctctgttttgaaggagctagtcatggtgcta
ccgaattctctgtctgagcatatgggctccttagttccaggcattgagaaagcattgaat
gataagacttcaaattcaaacctgaaaattgaggctttggtgtttactcgtttgattatg
gcttctcattcgccaacagtctttcatccgcacattaaggccttgtcagaacctgtgcta
gctgctgttggagagagatattataaagttactgcagaggctttaagagtttgtggcgag
cttgtgaaagcaattcgtccaaattttgacaaccctcctgccttcaactttgttccattt
gtgcaacccatttacaacgccatctttaagaggttgactgctcaagatcaagatcaggaa
gtcaaggaatgtgcaatatcttgcatggggctcgtcacctccattcttggagatcatctc
aagaaggaactgaacacgtgcttacctctgttgttggagcgtttgcgaaatgaaatcaca
agactcacagctgttaaggcgtttgcaaccattgcagagtctcctttgagcatagactta
tccccagtcctagagcaagtcgttacagagctgacaacgttcttgcgcaaggcgaaccga
actctgcgacaggcctcattgtgcactttgaactcgctacttacggcttacagcaacaaa
attagcccagccagctacaaatccattgtcatagagttatcttccctaatcagtgacgca
gacttgcacatgacagcgttaacattggagttatgttgcaccatgatggttgatgaaaaa
caccactccaatgctggtgctgctattcgggaacgtgtattacctcaagccctcgtcctt
gttaaaagttcgctactacagggtcaagcgttgcagactcttcaagccttttttgcggct
ctagtactatcgacaaatacaagttttgattcactattggaagctttgctttccactgcg
aggaccgcgtctcctggtgggcctgccagtaagcaggcatttcattccactgcgcaatgt
gcagccgtattatgtctggcagcaggagagaaaatgtgctctcaaactgtgagcatgttg
ttgaccactttaaggtcgagcgatggaacggatgcagcgcagttattgtctttgttatgc
ctaggggaaataggaaggagaagggacctgagtagccactccaacatagaaggggtcgtg
attagatcttttcagtctccatccgaggagattaaagctgccgcgtcatatgcattgggt
aatattgctgttggtaatttggctcagtatctgccgttcattctcagccaaatcgatcgc
caggctaaacttcaatatctactgcttcattcgttgaaggaggttatatcacgtcaagct
atggatggtgaagcgaaaggaaacatggatttgcaagatgcagatgttcagaaaatcctg
agtttgctgtttacacattgcgagagcgaagaggaaggagttcgcaacgtagtagcagag
tgtctgggaaagctggctcttattgaacctgagaagttggtaccagctcttaaggaacgt
acagctagtccttcagcttatacaagggcgacagtggttattgcaattaaatatacaatt
gttgagcgaccacagcctattgactcctacgtcaagtcgtgtatatcatccttcttgcta
cttattaaggatgtagacagacacgtgcggagggctgcagtgtcagcattgagcacagca
gctcacaacaagcctgctcttgtgaaggagttgctacctacgttattgccactcctctat
gatcaaacagtagtcaagaaagagctcatcaggaccgtggatcttggtcctttcaagcat
attgtggatgatgggctggaactcaggaagggagcctttgaatgtgtggataccttgctc
gacagttgccttgatcagatcaatccttcattttttatcactcctcacctgctgtctggt
ttagcagatcattacgatgtgaaaatgccatgtcatctaatcctatcaaagttggcagcc
aagtgcggaggtgcagttctagctgtgatggatgcgcttgtggagccattggaaaaaact
atccaacacaaaacaaaacccgatgctgtgaagcaagaggttgaccgtaatgaggacatg
atccgaagcgctcttcgtgcaattgattctctgaatcggataagtggggagcctacacct
cgattcaaggctttcatgaaccatgtggtcaaggtaggttcgcttggagagaaatacaac
gtggtgcgtcatgagagcgacactttgggtgctggggacattatggatttgaattaa
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