Physcomitrium patens (spreading earthmoss): 112286319
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Entry
112286319 CDS
T01041
Name
(RefSeq) mRNA export factor GLE1
KO
K18723
nucleoporin GLE1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
ppp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112286319
03015 mRNA surveillance pathway
112286319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112286319
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112286319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
112286319
NCBI-ProteinID:
XP_024383848
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Position
9:complement(14414256..14418936)
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AA seq
681 aa
AA seq
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MFSSSGSPNGLSSHRSPPYASRATPAPESPGVSPGVSPGGRLQLILKSPYKSKVVSVVEK
FVDPSPDWTLQDLQSELDVISTRYTSTVALDNEPPPSTAKGISWRELSVTADFGRTNAPF
RMRAFDSDSETESSDDELNSPAPASSNRVNGVGVGKDDHIRHANSKGSEELLVVVKDDVR
ESSPLLARTGYVESALLELERERHSRVQEEFRKRRLLLDNALREEVQREAALLARVEKEK
EAKCELARRSDKQDQRQIAELRDEHLSALQRDHELRSQFEARQIRKEAAEEEARRQEIAA
REERERQAKAKIQLAKEKAEAEAAKRKAQADAAAAAALKREEDQKAKENLQQSAKEKDAH
KENADQKESTSKATTGLKPKVAPSAAKLEESRLINLRAYEAVYAPLRTNPVQQKELKTYE
RQIIKHLQQIAATQQQVGIKSRDLLQFLNSSMGVPTQFLLVTLGAKLLSQCESQILKLPS
FAFALAQVIVNVASQVPLLIDIVLAKLHEVCIFTVPKYYVFTKDQFENDAAYYKALGYRE
EDGKLESTDDYVARQAAYMTFYGAMIQTDVAGGKNPHGLAAGWAWVARFLNSIPADRNTA
SALEAFLKMAGFRLYQVYPKPFMRIMQAIVTEYIENLKKTGDGDARAVVSRLETFLHLQK
YLQEPEGRKMPVTDVSSSLKA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctcgtccggttctcctaatggcttgtcatcacatcggtcgcctccttatgct
tccagagcaacaccagctccagagagtcccggagtgagccctggcgtcagtcctggaggt
cgtttgcagcttattctcaagagtccctacaaatctaaagttgtgtctgtcgttgaaaaa
ttcgtggatcctagtccggattggactttgcaggatttgcaatcggagctggatgtgatt
tccactcgctacacttctactgtggctttagacaatgagcctcctccttcgactgcaaaa
gggatatcgtggcgagaattgtctgttacagctgattttggcagaacaaatgcgccattt
aggatgcgagcatttgacagtgattctgagactgagtccagtgacgatgagctcaattct
cctgcgccagcttcatccaaccgcgtcaatggtgtaggcgttggaaaggatgatcatatt
cggcacgctaattcgaagggttcggaagaattgcttgtagtagtcaaggatgacgtgcgg
gagagtagtccacttcttgcacgaactggatatgtggaatccgctctcttagagctggaa
cgagaacgccatagtagggtacaggaggaatttcgaaagaggcggctgcttcttgataat
gccttgagagaggaagtgcaaagagaggcagccttacttgcgcgtgttgagaaagaaaaa
gaagccaagtgtgagttggcaaggcgctcggataaacaagatcaaagacaaattgctgag
ctacgagatgaacatctatccgcccttcaaagggatcacgaacttcggtcacaatttgaa
gctcgccagatcagaaaagaagctgccgaagaagaagctcgtcggcaagaaatcgccgct
cgagaagagagagaacgacaagctaaagctaaaattcagctagcaaaagagaaggctgaa
gctgaagcggccaagaggaaggctcaagcagatgctgcagcagcggcggctttaaagcgt
gaagaggatcagaaagcaaaggaaaatttgcagcagagtgcaaaggagaaggatgctcac
aaggaaaatgctgatcagaaggagtctacttcgaaagcaaccacaggattgaagccgaaa
gtggcaccttctgcagccaaattagaggagtctcgattaatcaatctgcgtgcgtatgag
gctgtatatgcacctctacgaactaatccagttcaacagaaggagttaaagacttatgag
aggcaaattatcaagcatttacagcagattgctgccacccaacaacaagtggggattaag
tcaagagacttgctgcagttcctcaacagttccatgggggtccctactcagtttttactt
gttactctgggtgcgaagcttctttcacagtgtgagtcgcagattttgaagctaccttcc
tttgcctttgcattggcacaggtcattgttaacgtggcctcccaggtgcccttgttaatc
gatattgtacttgcgaagctacatgaagtttgtatcttcactgtccccaagtattatgta
ttcacaaaggatcaatttgaaaatgatgctgcttactataaagcgctagggtatcgggaa
gaagatgggaaattggaaagcaccgatgattatgtcgcacgtcaggctgcatacatgaca
ttttatggcgcgatgattcagactgatgtggcaggagggaaaaatccccatggattagca
gctgggtgggcttgggttgcacgtttcttaaatagcatcccggcagatcggaataccgcc
tcggctttagaggcgttcttgaagatggcaggattcaggctctatcaagtctatccaaag
ccattcatgaggattatgcaagcaattgtcacggaatatattgaaaacctcaagaaaact
ggtgatggagatgctagagctgtagtttcacgattagagacatttctgcatcttcaaaag
tatttgcaggagcccgagggtaggaagatgcctgtcacagatgtctcatccagcctgaaa
gcgtga
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