Physcomitrium patens (spreading earthmoss): 112286521
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Entry
112286521 CDS
T01041
Name
(RefSeq) clathrin heavy chain 2
KO
K04646
clathrin heavy chain
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04142
Lysosome
ppp04144
Endocytosis
ppp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112286521
04142 Lysosome
112286521
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
112286521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112286521
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112286521
Membrane trafficking [BR:
ppp04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
112286521
Exosome [BR:
ppp04147
]
Exosomal proteins
Proteins found in most exosomes
112286521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
Clathrin_propel
Clathrin-link
TPR_PEP5_VPS11
TPR_Vps41
TPR_COPA_B
IcmW
Motif
Other DBs
NCBI-GeneID:
112286521
NCBI-ProteinID:
XP_024384237
UniProt:
A9T0L4
LinkDB
All DBs
Position
1:complement(26183780..26193906)
Genome browser
AA seq
1709 aa
AA seq
DB search
MAAASAPITMKEALTLTSLGINQQFVTFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ
PLRRPITADSALMNPNSRVLALKALIPGSTQDHLQIFNIELKAKMKSYQMPEQVVFWKWI
SPRLLGLVTQTSVYHWTIEGESEPVKMFERTANLSGNQIINYRCDPAEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFASHQVAGNDSPSLLIAFTTKTLTAGQLTS
KLHIIELGATPGKPGFSKKAADLFFPPDFADDFPVSMQISSKYGLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTADAPTVGGFYAVNRRGQVLLATVNEATIIPFVSNQLSNLEL
AVNLARRGNLPGAEGLVVQRFQELFSQMKYKEAADLAAESPQGILRTPDTVAKFQSVPVQ
PGQTSPLLQYFGTLLTKGKLNVFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDMALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRADPQ
GAVNFALMMSQLEGGCPVDYNTVTDLFLQRNMIREATAFLLDVLKPNLPEHALLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYMRALQHYTELNDIKRVVINTHAI
EPQGLVEFFGTLSKEWALDCMKELLQVNMRGNLQIIVQVAKEYGEQLGVDACVKLFESFK
SFEGLYFFLGAYLSTSEEPEIHYKYIEAAAKTGQIKEVERVTRESNFYPPERTKNFLMES
KLPDARPLINVCDRHGFVPDLTHYLYVNNMLRYIEGYVQKVNPQNAPLVVGQLLDDDCPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDT
NNNPEHFLTTNPYYDSKVVGKYCEKRDPTLAVVAYKRGNCDDELVNVTNKNSLFKLQARY
VVERMEPDLWLKVLNPENPCRRQLIDQVVSTALPESKNPEQVSATVKAFMTADLPHELIE
LLEKIVLQNSAFSGNPNLQNLLILTAIKADTTRVMDYINRLDNFDGPAVGEIAVGAELYE
EAFAIFKKFNLNVQAVNVLLDNIRNIDRAVEFAARVEEDDVWSQVGKAQLREGLVSDAIE
SFIKANDASQYNEVIDVASGVRAYEDLVRYLNMVRKKVKEAKVDSELIFAYAKLNRLDDI
EEFIVNPNLANLQTVGDRLFDGELYEAAKIIFTHISNWARLASTLVKLHQFQAAVDAARK
ANSARTWKEVCFACVDAEEFRLAQICGLNVIVQVDDLEEVSEYYQNRGRFDELISLMESG
LGLERAHMGIFTELGTLYARYRPDKLMEHLKLFITRINIPKLIRVCDEQQHWKELTYLYI
AYDEYDNAAATMMSHSPEAWEHMQFKDVAVKVANVELYYKAVYFYLEEYPELINDLLNVL
SARVDHTRVVDIMKKAGYLPLVKPYMVAVQSANNAAVNEALNNLYIEEEDYERLRESIDM
YDNFDQISMAQRIEKHELLEMRRVGAYIYKRAGRWKQSVALSKKDNLYKDAMETCSQSGD
RELAEELLTFFVDKGKKECFAACLYTCYDLIRADVAVELAWMHGMMDFAVPYLLQFLREY
STKVDDLIKDKLEATEEKKSKEQQEKDVVAESNMYAQLLPLALPAPPVAGMTGMPGMGGG
MPMPGMSGMPGMPGMPGMSGYGMPSMSAF
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgctagcgcgcccatcactatgaaggaggctctcacgctgacgagtcttggg
attaaccagcaattcgttacgttcacacatgtgacgatggagtctgataaatacatttgc
gtacgggagacgtcgcctcaaaacagtgtggtgattattgatatgtcgatgcctaaccag
cctctgcgtcgcccgatcactgcggactctgccttgatgaatccgaacagcagagtcctg
gctctgaaagccttgatacctggttcgacacaagaccatctccaaatctttaacatcgaa
ttaaaagctaagatgaaatcgtatcaaatgccagagcaggtggttttctggaagtggatt
tcgccaagattacttggactcgtgacacaaacttcagtgtatcattggactatagaaggt
gaatctgaacctgtaaagatgtttgagaggacagcaaacctgagtggcaaccagatcatt
aactacagatgcgaccccgctgagaaatggcttgtattgattggtatcgcccctggagca
ccggagcggccccaattagtgaagggaaatatgcagttgttttcagtcgaccagcagagg
agtcaagcactagaagctcatgctgcatcatttgcttctcatcaggtggccggaaacgat
tctccatctctactgattgcattcactacaaaaactcttacagctgggcagctcacatcc
aagctgcatattattgagctgggtgctacaccaggtaaacctggtttctcaaagaaggca
gcggatctgttttttcctccagattttgccgacgactttccagtttcaatgcagatctca
tctaaatatggcctcatttatgtgattacaaaacttggtcttctttttgtctatgatctg
gaaactgcaactgctgtgtatagaaaccgaattagtccagatcctattttcttgacagcg
gatgctcctacagttggtggtttttatgccgtcaatcgtcgaggccaagtcctccttgct
acagtcaatgaggctacaattatcccatttgttagtaaccagttgagcaacttggagctg
gcagtgaatcttgcaagacgaggaaacctgcctggagcagagggactggttgtacaacgt
tttcaagagttattctctcagatgaagtataaggaagcagcagaccttgcagcggagtcg
cctcaaggcatccttcgaactccagatactgttgccaagtttcagagtgttccggtacag
ccaggacaaacttcaccattattgcagtactttgggactttattgacgaaggggaagttg
aacgtatttgaatcccttgagctttcgcggctagtggttaaccaaaacaagaagaatcta
ctggagaactggttggcagaagacaagctggaatgtagtgaagagttaggagatcttgtc
aagactgtggacaatgacatggcactcaagatatacatcaaggccagggccacaccaaag
gttgttgcagcttttgctgaacgtcgtgaattcgacaagattctgatctactccaagcag
gtcggatatactccggattatcttttcctactgcaaactattttgcgagctgaccctcaa
ggtgccgtgaactttgctcttatgatgtctcaactagaaggtggttgccccgttgactat
aacaccgtcaccgacttatttcttcagcgcaacatgattagggaggccaccgctttcctc
ttggacgttttgaagccaaatcttccagagcacgccttgctccagaccaaggttctggaa
attaatttggtcacgtttcctaatgtcgctgatgcaatactggcaaatggaatgtttagc
cattatgaccgtcctcgtgttgctcaactttgcgagaaagctggtctgtacatgcgagcc
cttcagcattacacggaattaaatgatatcaagcgcgttgttatcaacacccatgccata
gagccacagggtctagttgaattttttggcactctgtcaaaagaatgggccttagattgc
atgaaagagttactccaagtgaatatgcgtggaaacctgcaaattatagtccaggtagcc
aaggaatacggggagcagctgggtgtcgatgcgtgtgtgaagttgtttgagagtttcaag
tcttttgagggattgtactttttcctcggagcatacttgagcacaagcgaggaacctgaa
attcactacaagtacatcgaggctgcggcaaagactggccaaattaaagaagtcgagcgt
gttacaagggagtccaatttctaccctccagagagaaccaagaatttcttgatggaatcc
aaactcccagatgcaaggcctctcatcaatgtttgcgaccgtcatggttttgtcccagat
ctcactcactacctttatgtcaacaacatgcttcgttacattgaaggttatgtacagaag
gttaaccctcaaaatgcaccattagtggtcgggcaattactggatgatgattgtcctgag
gacttcattaagggtttgatcctatctgtacgctccctccttccggtggagccattggtt
gacgagtgtgaaaagaggaaccgattgaggttgttgactcagttcttggagcaccttgtg
agcgaaggtagtcaagatgtgcatgtccacaatgctttggggaaaatcattattgataca
aacaacaatcctgaacatttcctcactacaaacccttactacgactccaaggttgtcggc
aagtactgcgagaagcgcgacccaactcttgctgtggtagcatacaaacgtggcaattgt
gatgatgagcttgtcaatgtcaccaacaagaattctctcttcaaactccaggccaggtat
gtggtcgagcggatggagcctgacttgtggttgaaggttctgaatccggagaacccctgt
aggaggcaactcattgatcaggtggtgtctactgctcttccagagagcaaaaatccagag
caggtgtcagccactgttaaggccttcatgactgcagatttgccacatgagctgatcgag
ctcttggagaagattgtgctccagaattcggctttcagtggcaaccccaaccttcagaac
cttctcatcctcacagcaatcaaggccgacacaactcgggtcatggactacatcaatcgt
ttggataatttcgatggtcctgcagtgggtgagattgcagtaggtgctgaactttatgaa
gaggcatttgcaattttcaagaagttcaacctcaatgtccaggcagtgaatgttcttctg
gacaacattcgcaacatagaccgtgctgtggagtttgcagcccgtgtcgaagaggatgat
gtttggagccaggttggtaaggcacagttaagagagggactggttagcgatgccattgag
tctttcatcaaggcaaatgatgcttctcaatataatgaagttatcgatgtggcatctggt
gtaagagcatacgaggacctagtgagatacttgaacatggtacgcaagaaggtgaaggaa
gctaaggtggactctgaattaatttttgcctatgccaagcttaatcggttggacgacatt
gaggaatttatcgtcaatcccaaccttgcaaatctgcaaactgttggagatcgcctgttt
gatggagaattgtatgaagctgccaaaattattttcacgcacatctccaactgggcaaga
cttgccagtactcttgtcaagcttcatcagttccaagcagccgtggatgcagcgaggaag
gccaatagcgcacggacatggaaggaagtctgctttgcttgtgtggacgccgaagagttc
cgcctggctcaaatttgtggtctcaatgttattgtccaggtggacgatttggaagaggtc
agtgaatattaccagaatagaggtcgctttgatgagctcatctcacttatggaaagtggg
cttggtttggagcgcgctcacatgggtatctttacagaactgggcactctgtacgccaga
taccgtccggataagcttatggagcatcttaagctgtttatcacccggattaatattcca
aagcttattcgtgtatgcgacgagcagcagcactggaaggaacttacgtacttgtacatt
gcatatgacgagtatgataatgctgcggctaccatgatgagccattctccagaggcctgg
gaacacatgcagtttaaggatgttgctgttaaggttgcaaacgtggaactttactacaaa
gcagtgtacttttatctcgaggagtatcccgagcttatcaatgacttactcaatgtgtta
tctgcacgggttgaccacacacgagttgtggatatcatgaaaaaggctggatacctaccg
ttggtgaagccatacatggttgccgtccaaagtgccaacaacgctgcagtcaatgaggct
ctgaacaacttatatattgaggaggaagattatgagcggctcagagagtctattgatatg
tatgataactttgatcagatttcaatggcacagaggattgagaagcacgaacttctggaa
atgcgtcgcgttggtgcgtacatctataagagagctggcagatggaaacaatctgtggct
ttgtccaagaaagacaacttatacaaggatgcaatggagacttgctcacagtctggagat
cgtgagcttgctgaggagctgcttacattcttcgtggacaagggcaaaaaagagtgcttc
gctgcttgtctatacacttgttacgaccttatccgtgctgatgttgcggtggagctggca
tggatgcatggcatgatggacttcgccgtaccttacttgctgcagttcttgcgtgagtac
tccacgaaggtggatgatttgattaaagacaaattggaagctactgaggagaagaagtcc
aaagagcaacaggaaaaggacgtagttgctgaatcgaacatgtacgctcaactcttgcct
ctggctctaccagctcctcctgttgctggtatgactggtatgcctggtatgggcggaggt
atgccaatgccgggtatgtcgggtatgccaggaatgccaggaatgcccggtatgtcaggg
tacggcatgccctctatgagtgctttttaa
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