Physcomitrium patens (spreading earthmoss): 112286601
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Entry
112286601 CDS
T01041
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppp03000
]
112286601
03036 Chromosome and associated proteins [BR:
ppp03036
]
112286601
Transcription factors [BR:
ppp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
112286601
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
112286601
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
SSrecog
HMG_box
HMG_box_2
YL1
CDC45
Motif
Other DBs
NCBI-GeneID:
112286601
NCBI-ProteinID:
XP_024384387
UniProt:
A0A2K1K1Z7
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All DBs
Position
9:2546305..2549124
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AA seq
674 aa
AA seq
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MGDTAVHQFNSILLGGRGGTNPGQLKINSGGFQWRKAGGGKVVEVSTSDIASLSWTRVPK
GFQLGVKLKAGRDVKFNGFRESDMANLGSFFTTNMGITSEEKPLAISGRNWGDVTLEGSS
LAFSVGGKHAFDVSIADVSQTQMQGKNEVMLEFHVDDTTGASEKDTLMELSFHIPTTNTT
YIGDEERPPAQIFREKILSMGDVGPSGAEAIALFEEVHILTPRGRYNVELHASFLRLQGQ
ANDFKIQYSSVVRLFILPKSNQPHTFVVITLDPPIRKGQTFYPHIVLQFPSEEIAECTLS
IGEELLNTKYKDRLQPAYKDLSHDVFTQILKGLSGAKVTRPGKFRSAQDGYCVRTSLKAE
EGTLYPLEKSFFFLPKPPTLILHDEIEYLEFERHGAAGTSSISSHYFDLLIRLKSEQEHQ
FRNIQRNEYHNLFNFISGKNLKIMNLGDAQGTSGVAAALEGSDDEGVDPHLNRIRSARES
GGAGLGDEDSDEEDEDFVAEKDDAGSPTDESDGEEPDGSDDGGGGSDEEEEDEEEERPKK
KREKREDVAPKSAPKKRKKKDEADGEDGGKKKRKKKEKDPNAPKRALSAFMRFQLEERKK
MKADPGQASMSFGEFGKSLGEKWRNMSASDKAPYEADAKVDQERYKKAMAGYKSGQSGPS
EAYDDGEDEGSDDE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaccgcggtgcaccagtttaatagcattttgctcggaggacggggagggaca
aatccagggcagctgaagatcaatagcgggggtttccaatggcggaaggcagggggtggg
aaggtggtggaggtttctaccagtgacatcgccagcttgagctggacacgggtacccaag
ggtttccagttaggggtgaagttgaaggcaggacgagacgtgaagttcaatgggtttcgc
gagtcggacatggcgaatctgggatcgtttttcactacgaatatggggattacgtctgag
gaaaagccgctggcgatcagcggtaggaattggggagatgtgactttggaagggagctcc
ctggcttttagtgtcggtgggaagcatgcgtttgatgtttccatcgcggatgtttcgcaa
actcaaatgcagggaaagaatgaggtgatgcttgaatttcatgtcgatgacacgacgggt
gcgagcgagaaggatactttgatggaattgagtttccacatacctactacgaatactact
tacatcggagacgaagagcgtccacctgcgcagattttccgggagaagatattatccatg
ggagatgttgggccctctggtgcagaagcgattgcattgttcgaggaagttcatattctt
acgcctaggggacgatacaatgtggagctccatgcctcctttttgcggttgcaagggcaa
gctaatgacttcaaaatccagtacagtagtgttgttcgtctttttattctgccgaagagc
aaccagccgcacacctttgtggtgatcaccttagacccccccattcgtaagggacagacg
ttctatccgcacattgtattacagtttccatcagaagagatagcagagtgtacgctgtct
atcggcgaagagcttttaaatactaagtacaaggatcggctccaacctgcatataaggat
ctgtcgcatgatgttttcacgcagatattgaaaggtctctcgggtgctaaagttacacgt
ccaggaaagtttcggagcgctcaggatggctactgtgtacgtacttcactcaaggcggag
gaaggcacgttgtatccgttggagaagagtttctttttcttgcctaagccaccgactctt
attcttcacgacgagatcgaatatttggagtttgagagacatggtgcagcgggcaccagc
agcatatcatcgcactactttgatctgcttatccgccttaagagcgagcaagagcatcag
tttcgaaacatccagcgtaatgagtatcacaatttgttcaatttcatcagcggcaaaaat
ttgaagatcatgaacttaggagacgctcaaggtacaagtggcgttgctgctgcgcttgaa
ggctctgatgatgaaggagttgatcctcatttgaatcgtattcgaagtgctcgggaaagt
ggcggcgctgggcttggcgacgaagacagtgatgaagaggacgaagatttcgttgctgag
aaggatgatgctgggtctcctactgatgaatctgatggagaggagcctgatggtagcgac
gatggtggaggtggttccgacgaagaggaagaggacgaggaagaagaaaggccgaaaaag
aagagagagaagagagaggacgtggctccgaaatctgctcctaagaaacgaaagaagaaa
gacgaagccgatggagaagatggtgggaagaagaaaaggaagaagaaggagaaggatccc
aatgcgcctaaacgtgcactttctgccttcatgcgctttcagttagaagaacgcaagaag
atgaaggctgacccaggtcaagcatccatgtcttttggggagtttggcaaatctctgggc
gagaaatggagaaacatgtcggcctctgacaaagcaccttatgaagctgatgcgaaggtt
gatcaggagcgatacaagaaggctatggcaggatacaaaagtggtcaatctggtccatca
gaagcctatgacgatggagaggacgaaggatctgacgatgagtag
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