Physcomitrium patens (spreading earthmoss): 112287040
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Entry
112287040 CDS
T01041
Name
(RefSeq) uncharacterized protein
KO
K15223
upstream activation factor subunit UAF30
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppp03021
]
112287040
Transcription machinery [BR:
ppp03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
112287040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
Acetyltransf_17
SRP54_N
PD-C2-AF1
TrAA12
Motif
Other DBs
NCBI-GeneID:
112287040
NCBI-ProteinID:
XP_024385412
UniProt:
A0A2K1K3Q9
LinkDB
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Position
9:12672203..12674635
Genome browser
AA seq
354 aa
AA seq
DB search
MVSDAEIVRHLTEVLKNADLNTTTTTAIRQQLQIALGVDLTDKKAFIRQQVDAYLQKQWQ
EAEAVAEPEVGAEDGGEGDGEGEGEGEEDEGSEKTGGGEDEELDVDGDTKASKGSKACVE
PDSKRMRAKIDRAIKASLTKEKKKRTGGGGGLTKACTLSPELQTIIGESELPRTQVVKQL
WAYIREHNLQDPEDKRKIICDDALRNLLGTNSTDMFKMNKLLSRHIWPLDNGVTEAAAKV
RDRDTDTDDVEPKPKKQKTVSSGGGKSKTQGFLAPYPISDQLAKFLDVEDGKVSRAEAAK
RMWAYIKDHNLQDPTNKKKILCDQPLQDLLDCDHFVGFDLSKLLKRHFIKPEAQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcagacgctgaaatagtgcgacatctcacagaggttttgaagaatgcggatttg
aatacgaccacgacgacggcaattcggcagcagctgcagattgccttgggagtcgatttg
acggacaagaaggcgtttattcgacagcaggttgatgcttatctgcagaagcagtggcag
gaggcggaggcggtggcggaaccggaggtaggggcagaggacggaggagaaggggacgga
gaaggagaaggagagggagaggaagatgaaggtagtgagaagacaggaggtggagaggac
gaagaattggacgtagatggcgatacgaaggccagtaagggttccaaggcttgcgtcgag
cctgattctaaacgcatgcgtgccaagattgatcgtgcaatcaaagcgagtttaacgaaa
gaaaagaagaagaggacaggtggtggaggtggccttacgaaggcttgtactctttctcct
gagcttcaaacgattataggtgaatctgagttgccgagaacgcaggtggttaagcaactg
tgggcttacattcgggaacataacttacaagatcctgaggataagcgcaaaattatctgc
gacgacgccctgcgaaatcttcttggcactaactccactgatatgtttaaaatgaataag
ttgctgtctaggcatatatggcctcttgacaatggggttacagaggctgctgcaaaagtt
agagatagggatacagatacagacgatgtggagcctaaacctaagaagcagaaaacagtt
agtagtggaggcggtaagagcaagactcaaggattcttggctccatatcccatctcagat
caattagctaagtttttagacgttgaggatggcaaagtctcgagggctgaagctgcgaag
cgcatgtgggcttacattaaggaccacaatttgcaggaccctaccaacaagaaaaagata
ctatgtgatcagcctcttcaagatctacttgattgtgaccattttgttggattcgatctt
agtaaacttttgaaacgccactttataaagccggaagcccaatag
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