KEGG   Physcomitrium patens (spreading earthmoss): 112287237
Entry
112287237         CDS       T01041                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    112287237
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppp03400]
    112287237
DNA repair and recombination proteins [BR:ppp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     112287237
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA MPSS2_M
Other DBs
NCBI-GeneID: 112287237
NCBI-ProteinID: XP_024385825
UniProt: A0A2K1JYQ2
LinkDB
Position
10:complement(8199440..8206166)
AA seq 732 aa
MLTSKAQLGRLQAVEDDGSTLKSGVLPIALFEGPNSIGRDDLVSANKQVSRKHVVLKTSS
DCTFELSVIGQNPVVIKSGSGKRKLLPNARALISAGDIIEFLPGKMPYKLTLEPTEDELV
HHSSRDVQSRRSSQAAHCEESGARSLSLLLQECKPSETKKKRELETIIIDSDEDEQVSKK
QKQQLIEDEAFAQAVQAEEDGAARASIRGNVSLLNEQHIGTSSSSKSPRAANKLDEAFGV
DYEAGCRSSSTFRLMQVKGLPQWANKGCVNIRGVIQGDVQVALLSNYMVDIDWLLEACPR
LKTVPSVVIFHGESGGSLELLQARKPNSWLLHKPPLRLSYGTHHTKAMFLLYPTGIRIVV
HTANLIYIDWNNKSQGLWTQDFPYKNVAAGESKPSPFENDLVEYLQALEWTGCIAIISGI
GEVHVDAAFFRKFDYSSAMVRLVASVPGYHLGRNLTKWGHLKLRTILQEQHFEEHFKGSP
CVYQFSSLGSLDEKWMGEFGSSIQAGSTFGNEQLGPGPVQIVWPTVEDIRNSLEGYAAGG
AVPSPLKNVERAFLSKYWYRWQADHTGRSRAIPHIKTFLRYNDQRLAWFLLTSSNLSKAA
WGVLQKNGSQLMIRSYELGVLFLPSLVGNNSNVTPFSCTYSSSILPRELQNREDDGGKRQ
LRHTKLVTLSWKSSNHEKSDMDIFVRLPIPYALPPVKYDPKDIPWSWDRQYREPDMFGEV
WPRQVRRYTMQS
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgttgacctctaaggctcaactgggacgtctacaagcagttgaagatgatggcagcacc
ttgaaaagcggtgtattgccaattgctctatttgagggtcccaattccattggccgagac
gatttggtatctgcgaacaagcaagtgagccgcaagcatgtggtcctcaagacttcttcg
gattgtacttttgaactatcagtgattgggcagaatcctgtggtgatcaaatctggatca
gggaaaagaaagctgttaccaaatgcaagagctttgatatctgctggagacatcattgaa
ttcttgcctggaaaaatgccttacaaattaactttagaaccgactgaagacgagttggtc
catcattcaagccgtgatgtgcagagtaggaggagctcgcaagctgctcattgcgaagaa
tcaggcgcaaggtcgttgtcacttctcttgcaagaatgtaaaccctctgaaactaaaaaa
aaacgggaactcgagacaattattatcgattccgatgaggatgagcaagtatcaaagaaa
caaaaacagcagctgatcgaggacgaggcttttgctcaagctgtacaggctgaagaagac
ggggctgctagggcttcaataagaggaaatgtatcgttattgaatgaacagcacataggt
acatcctcctcgtctaagagtccaagggccgctaacaaattggacgaagcgtttggagta
gactacgaagccgggtgcagatcaagctctacgttccggttgatgcaggtgaaaggcttg
ccacagtgggcaaataaagggtgtgtgaacataagaggtgtcatccagggcgacgtgcag
gtagccttactgtccaactacatggtagatattgactggctacttgaagcttgcccacgc
ctaaaaacggttccttcagtggtcatctttcatggagaaagtggaggttcgcttgagctc
ctccaggccaggaagcctaattcgtggttgctccacaagccacctcttagattgagctac
ggcacacaccatacaaaagccatgtttctgctttacccaactggtatacgtattgtcgtg
cacactgcgaatctgatctatattgactggaataacaaatcccaaggcctttggacgcaa
gactttccatacaaaaacgtagctgctggcgaatccaagccatctccatttgagaatgat
ttggtggagtatctgcaagctcttgagtggacagggtgcattgcaattatttctggaatt
ggtgaagttcatgttgacgctgctttctttcgcaagttcgactacagtagtgccatggtc
cgactggttgcttcagtcccgggatatcatctcggtcgaaatctgacaaaatggggtcac
ttgaagcttcggaccattttgcaagagcagcattttgaagaacatttcaaaggatctccc
tgtgtatatcagttctcatctttaggttctttggatgagaagtggatgggtgaatttggc
tcttcaattcaagcaggatcgacatttggaaatgagcaacttggtcctggcccagttcaa
atcgtctggcctactgtggaggacattcgaaattccctcgagggttatgctgcaggcggt
gcagttccaagtccgctaaaaaatgttgaacgagcttttctatctaaatattggtatcgg
tggcaagctgatcatacaggtcgaagccgtgctattccccacataaaaacgtttttgcga
tacaatgaccaaagacttgcatggtttttgctgacatcatcaaatctaagcaaggctgca
tggggagtattgcagaagaatggttcacagctcatgatcagatcctatgagctaggtgtt
ctgttcttgccttcgcttgttggaaacaactcaaatgtcactcccttttcatgcacttac
agctcctctatcttgcccagagaattgcagaacagggaggacgatggaggtaaaagacaa
ctacgccacacaaagctcgtcacactgagctggaaaagcagcaaccatgaaaaatcagac
atggacatttttgtacgcttgcctataccatatgcattaccaccagtgaaatatgacccc
aaagacataccatggtcgtgggatcggcaatacagagagccagatatgtttggtgaggtt
tggcctagacaagtacgtcgttacaccatgcaaagctaa

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