Physcomitrium patens (spreading earthmoss): 112287472
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Entry
112287472 CDS
T01041
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppp03009
]
112287472
03036 Chromosome and associated proteins [BR:
ppp03036
]
112287472
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112287472
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
Pre-60S particles
Helicases
112287472
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
112287472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
DD_DDX21-DDX50
ResIII
GlcNAc-1_reg
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
112287472
NCBI-ProteinID:
XP_024386253
UniProt:
A0A2K1JZV7
LinkDB
All DBs
Position
10:complement(14352595..14356498)
Genome browser
AA seq
695 aa
AA seq
DB search
MPGPVAMENGQLTVENGKKSKKVKVTESVGEEIEVTASPPLPESEKKKKKKEKKVSSDSA
EGSAEAENGHAGEPEVVKVSKKKRAKSPEDDGAAAKKIQKVVENGGKEVGAAVDPMAVSN
FNIGKALRDKLKAKGIESLFPIQAQTFEAVFDGNDMVGRARTGQGKTLAFVLPVLESLSQ
SGYTKNLQRGRAAAVIVLAPTRELAKQVHADFETYGSAVGLSTVCVYGGAPYGPQENALR
RGVDIVVGTPGRIKDHFERGTLNLKSLKFRILDEADEMLNMGFVDDVETILGGVDDPSKV
QTLLFSATLPTWVQQIARKFLKATRKTVDLVGDEKMKASNSVRHLLLPGHYSMRTQLVQD
VISCYGSGGRIIVFTETKNDASELAGALKSGTARALHGDIPQNQREVTLQGFRTGKFSVL
VATDVAARGLDINDVQLVIQCEPPRDAETYIHRSGRTGRAGNTGVSVLFFDRKKEYMVPQ
IERKAGFKFERIAAPQPLDIAKASGNTATDSVLAVSDTVVPLFRQAAKDLVESSGLPILD
ILAKAIAKISGQTELKRRSLLTSHDDSTTLILKANTSMYSPTYAFNCLRKFLPETIINEV
RRMNLTVDGKGAVFDVPSKNVDEFIAEQEGENFTVEVLDALPELQVKPDRSGGEDRSFGG
RGGRGGRGFGGRGGGYGGSRGGSRGGGGGGRFNRR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgccgggacctgtagctatggagaacggccagttgactgtggagaatgggaagaagagt
aagaaggtgaaggttaccgagtcggtgggtgaggagattgaggtgactgcgtcgccgccg
ctgcccgagtcagagaaaaagaagaaaaaaaaagagaagaaggtgagttcggacagtgcg
gaggggtctgctgaggcggaaaatggtcacgctggagaacccgaagtggtgaaggtttcg
aagaagaagagagccaagtctcccgaggatgacggcgctgcagctaagaagatccaaaaa
gtggtagagaatggcggcaaagaggttggtgctgctgtcgacccgatggcggtgtcgaat
tttaacatcgggaaggcgctgcgggacaagttgaaagctaagggcattgagtcgcttttc
ccaatccaggctcagacctttgaagctgtcttcgacgggaatgacatggttggtcgggca
cgtacaggacagggtaaaaccttggcatttgtgctacccgttttagaatctttgagccag
agtggctacactaagaatctccaaagaggtcgtgctgcagctgtcatcgttcttgctcca
acccgcgaactcgctaaacaagtgcatgcggactttgagacttatggtagcgctgtcgga
ttgagcaccgtttgtgtttatggtggagcaccttatggtcctcaagagaacgcattaagg
aggggtgttgatattgtggtgggcacaccagggaggatcaaggatcacttcgagaggggc
actttgaacttgaaatctttaaagttccgcattctcgacgaagccgatgagatgcttaac
atgggatttgtggatgatgtggagactattcttggcggtgttgatgatccctcaaaggtg
caaactctactgttcagtgcgacactacccacttgggttcaacagatcgctcggaagttt
ttgaaggctacaaggaaaactgtcgatctagttggtgacgagaaaatgaaggctagtaac
agtgtgagacatttattacttccgggccactattcaatgcgaacccagcttgtgcaagat
gtgattagctgttacggcagtggaggccgcattatcgtctttacagagacaaagaacgac
gcctcagaactcgcaggagctctgaagagtggtactgcacgagctctgcatggtgatatt
cctcagaatcagcgagaagttacccttcaaggatttcgcacaggaaagtttagtgtactt
gttgcaactgatgttgctgccagagggttggacataaacgatgtgcaactggtgattcag
tgtgagcctcctcgtgacgcagaaacctacattcaccggtctgggcgtacgggaagagct
ggaaatactggtgtttctgtgttgttttttgaccggaagaaagagtatatggttcctcag
atcgaacggaaggcaggatttaagtttgagcgaattgctgcccctcaacccctggacatc
gccaaggctagcggcaacacggcgacagatagcgtgctcgctgtatctgatactgtggtg
cccttatttcgtcaagcagctaaggatcttgtggagagcagtggtttgcccattctggac
atccttgccaaggccattgctaaaatttcaggtcaaacagagttaaagagaagatctttg
cttacttcgcatgacgattctaccaccttaatcctcaaggcaaatacatcaatgtattct
cctacatatgcattcaattgtctacgaaagttcttgcctgaaaccattatcaacgaagtt
aggcgcatgaatcttactgttgacgggaagggagcagtgtttgacgttccgtcgaaaaat
gtggacgagtttatagctgaacaagaaggtgaaaacttcacagtcgaagtcttggacgct
ttacctgagttgcaagtgaagcctgaccgcagtggtggtgaagaccgaagttttggtgga
agaggtggtagaggtggaagaggctttggaggaaggggtggtggttatggtggtagtcga
ggtggaagcagaggtggaggtggcggtggtcgtttcaaccgtcgttga
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