Physcomitrium patens (spreading earthmoss): 112287486
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Entry
112287486 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K11088
small nuclear ribonucleoprotein D3
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112287486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112287486
03041 Spliceosome [BR:
ppp03041
]
112287486
03032 DNA replication proteins [BR:
ppp03032
]
112287486
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
112287486
Spliceosome [BR:
ppp03041
]
Complex A
U1 snRNP components
Sm proteins
112287486
U2 snRNP components
112287486
Complex B
U1 snRNP components
112287486
U4/U6.U5 tri-snRNP components
112287486
Complex C
U2 snRNP components
112287486
DNA replication proteins [BR:
ppp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
112287486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Mpt_N
Motif
Other DBs
NCBI-GeneID:
112287486
NCBI-ProteinID:
XP_024386281
LinkDB
All DBs
Position
10:complement(8677267..8679754)
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AA seq
226 aa
AA seq
DB search
MSEESFLFVHFAFKTAQTVPSHPRPGSLFTHLRIFILDPMSLRNRNMHKDADIYADEYIF
GDRDIFSNIDRGIGKGKFKVGRACPKVDEKLIEDESIDVPLKLLHEGEGHGVTVELKNGD
VCRGKLIESENNWTLQLDTANFVFRKTRHKIFSRTGKEVKLDSIFIRGRRIKFIVFPHML
QYSFPFKSSNSITKGVTEEDLIFNLRLLHLTNYSQKMALDQGQYHM
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggaatcattcctctttgtccattttgcattcaagacagcccaaactgttccg
tctcacccccgtcccggtagcctctttactcacctcaggattttcatattagacccgatg
tcgctaagaaacaggaatatgcataaagacgcagatatttacgcagatgaatatatattc
ggagaccgagacattttttctaacatagaccgaggaatcggcaagggtaagttcaaagtt
gggcgagcatgtccaaaggttgatgagaagttgatagaggatgagtcgatagacgtccct
ttgaagctgctgcatgaaggagagggtcacggagtcactgtggagcttaagaacggcgat
gtatgtcggggcaagctcattgaatccgaaaataattggactctccaacttgataccgcc
aatttcgtctttaggaagactcggcacaagatattctcgaggactggcaaagaagtgaag
ttggactccattttcattcgtggtagaagaataaagttcatcgtctttccacacatgctt
cagtattcattccctttcaagtcgtcaaactcaataactaagggggtaacagaggaagat
ctgatatttaatctaagactccttcaccttacgaattattctcagaaaatggcattggat
cagggccaataccacatgtga
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