Physcomitrium patens (spreading earthmoss): 112287613
Help
Entry
112287613 CDS
T01041
Name
(RefSeq) RNA pseudouridine synthase 7 isoform X1
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppp03016
]
112287613
Enzymes [BR:
ppp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
112287613
Transfer RNA biogenesis [BR:
ppp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112287613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
112287613
NCBI-ProteinID:
XP_024386545
LinkDB
All DBs
Position
10:complement(3952065..3957291)
Genome browser
AA seq
557 aa
AA seq
DB search
MVFLHTAVAQYQFEPIHVAASRIVDTNTTHGFSAVTLCRGRFIMAATGKLAISHGGVEAE
VEAQIAADLNITWETPSTTPCPDDYIIMNGTRMVRPYFFEFLAHVKKRWEGKTVVDLFAQ
EFRQRPREYYEEAVKRGRIRVEGKVVAPSYVVRDSQTMSHFVHRHEPPVLAGRVIVLEEG
PDIIVVSKPATVPVHPCGQYRKNSVISILEAEHKTGPLFPVHRLDRLVSGLLILARNSRT
ADFFRQEIEAGVVQKQYVAKVKGVFPAEEVELNAAVIYDPREGRSSVEVRARPAKEIAVE
IESTLKGASKRTPESDAKSKESCTKFRRLSTDGVDSIVQCMPLTGRTHQIRVHLQYLGFP
IANDDLYLHSNVTKRSKANTTADRAAKIPEVPETISEVKDSSIAVLSTVSVDVNYSDERL
DSSNVTAPSVAVTNTKQGDNTREAEREKLQEHSKNAEIIDRRSSEDAENACSNGGDLLEP
GVSLSIEANEVPELQKERSQFVSKSINPNFMVDPLCTHCPNMAPTGYTGDDEGLWLHCIR
YSGSNWTYECPLPEWAL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtctttctgcatactgctgttgcccaatatcaatttgaaccaatccatgtagcagcc
tcccgcattgttgacacaaacaccactcacggtttcagtgctgttacactgtgtcggggc
cgttttatcatggcagccactggtaagttagctattagtcatggaggagttgaggccgag
gtggaggcccagatagctgcagacctgaatattacttgggagactccttcgactaccccg
tgtccagacgactatatcatcatgaatggaactcggatggtgcgcccctacttctttgaa
ttccttgctcacgtcaagaagcgatgggagggaaaaactgtagtggatctatttgcacaa
gagttccgtcagcgtccccgtgaatactatgaggaagcagtcaaacgaggccgcattcga
gtggaaggaaaggtggtggctccttcgtatgtggttcgtgattcgcaaacaatgagccac
tttgtccacaggcatgaaccacctgtattagccggacgcgtaattgtgcttgaagaagga
ccagacatcattgttgtctccaaaccggctacagttcctgtgcatccttgtggtcagtat
cgcaagaattcggtgatcagcattttggaggctgaacataagaccggtcccctctttcct
gtgcaccgcttggatcggttagtttcaggacttctcatcttagcacggaattctcgtaca
gcagatttttttcggcaagagattgaagctggagttgttcagaagcaatatgtggctaag
gtgaagggcgttttcccagcagaggaggtggagctgaatgctgcagtgatctatgatcct
cgtgaaggcagaagttctgtggaggttcgagcccgtcctgcaaaagagatcgcagttgag
attgaatcaactcttaaaggagcttcaaaaaggaccccagaaagtgatgctaaaagcaag
gaatcatgtacaaaatttcggaggttgagtaccgatggtgttgacagtatcgtacagtgc
atgcccttaacaggtcgcacacaccagattagggtacacttacaatatttgggctttcca
atagcaaatgatgatctctacctgcactccaacgtcaccaagcgttccaaggcaaatacg
acagcagacagagctgctaaaattccggaggttccagaaaccatatcagaagttaaagac
agctccattgctgttctttctactgtttctgtagacgtgaattacagcgatgagagatta
gattcaagcaatgtgactgctccgagtgttgctgtcacaaacaccaaacagggtgataat
actcgtgaggcagaacgagagaaacttcaggagcatagcaagaatgctgaaattatcgac
cgtcgatcaagcgaggatgcggaaaacgcgtgctccaatggtggtgatctattagagcca
ggtgtatcactgtcaatagaagctaatgaagttcctgaactgcaaaaggagcgttcccaa
tttgtttctaagagtataaatccaaacttcatggtcgatcctctgtgtacccactgcccc
aacatggcacctacagggtatactggtgacgacgaaggactgtggttgcactgcatccgc
tactcaggcagcaattggacctatgaatgtcctctacccgaatgggctctgtga
DBGET
integrated database retrieval system
