Physcomitrium patens (spreading earthmoss): 112287739
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Entry
112287739 CDS
T01041
Name
(RefSeq) serine/arginine-rich splicing factor SR30 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112287739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112287739
Spliceosome [BR:
ppp03041
]
Common components
Common spliceosomal components
SR proteins
112287739
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
112287739
NCBI-ProteinID:
XP_024386871
UniProt:
A0A2K1LB36
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Position
1:complement(25014538..25019135)
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AA seq
355 aa
AA seq
DB search
MSSRASRTIYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDGRDAED
AIRGRDGYNFDGNRLRVEIAHGGRGPPPAVDRYSIYSSGGRGGGGSAADCGGRAGGVSRR
SEYRVTVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDGTSGTMGIVDFTNYDDMKYAIRK
LDDSEFRNPFSRSFIRVKEDKGYGSSRRSVTRSRSRSRSRSRSKSPRNRSPRSRSRSPRS
PTPLSARSRSRSRSRSGSRSRSRSRSRSPSRSRSRSRSLSVRSLSKSLSPSPVQGSPWKK
GSRSPRLSRSKSPVKMANGRRSSSEEKNGSMSPKGDNEDRSFERSISPVSENGKD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgtgcgagtcgtacgatttatgttggaaaccttcccggtgatgtgagggag
cgagaaattgaagatctattttacaagtatggacgaattgtggacattgacctgaaatta
cccccccgcccacctggttattgttttattgagttcgaagacggaagggatgcggaagat
gctattcgtggacgggatgggtacaactttgatgggaatcgattgcgagttgaaattgcc
catggtggtcgtgggcctccgccagcagtggatcggtatagcatctatagtagtggtgga
aggggtggaggtggaagcgccgcagattgtggtggtcgtgcaggaggggtttctcgccgg
tccgaatatagagtaacggtgaccggattaccatcgtctgcctcgtggcaagatttgaag
gatcacatgcgtagggctggtgatgtgtgctttgcacaagtttttcgtgatggcacttcg
ggaacaatgggcatcgtggacttcacgaattatgatgatatgaaatacgctatccggaag
ttggatgactcagaatttcggaacccattttctcggtctttcattcgggtaaaagaggac
aagggttatgggtcttctcggaggagtgttactcgaagccgttcacgtagccgcagccgc
tctcgcagcaagtctccgcgtaaccgatctccacggtcgcgatctcgttcaccacgctcc
ccaactcctctgtccgcccggtcgcggtcgcggtcgcggtcacggtcggggtcacggtca
cggtcgcggtcacggtcacggtctccttcgcgatctcgttcccgttctcgttcgctctct
gtgcgatcactttcaaagtcattgtcaccttcgcctgtacagggatcaccttggaagaaa
ggtagccggagcccccgcttaagccggtctaaatctccagtgaaaatggcgaatggaaga
agaagctccagtgaggaaaaaaacggtagtatgagtcccaagggagataatgaggatcgg
tcttttgaacgcagtatttctcctgtatccgagaatggtaaagattaa
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