Physcomitrium patens (spreading earthmoss): 112287740
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Entry
112287740 CDS
T01041
Name
(RefSeq) SWI/SNF complex subunit SWI3C homolog
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112287740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppp03021
]
112287740
03036 Chromosome and associated proteins [BR:
ppp03036
]
112287740
Transcription machinery [BR:
ppp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112287740
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112287740
PBAF complex
112287740
GBAF(ncBAF) complex
112287740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
112287740
NCBI-ProteinID:
XP_024386850
UniProt:
A0A2K1JYC2
LinkDB
All DBs
Position
10:6117224..6123033
Genome browser
AA seq
897 aa
AA seq
DB search
MTTKRQPVISGASPAGLKIKLRSGAAAATKPSKGNQLEESGEDLGADSGDDSGMNEGILK
RKRTSPPPSQISNKRPAIEDSPVPLGPNGEPVEVVPGKSERVAGDLNVVKQRVGQPHSSV
GAILQAEQSVQLGGDRDYEEAKKNNPNLENISHGQLLVNSVAPADQSGAFLLGRKAGADP
AGFGQQPHLMPIGLQLSSGIPGSRTNGGTTEQHIIPSHAGWFSWTEIQTLEKRGLPEFFN
GKTPGKTPKLYMDYRNAIVKKYRENLKKMITVADVQELLVGLDEKTISRILDFLDHWGLI
NYQVPAELRPLWQGPVLALEPDEAGILRALPRKGSSLYEFDSIRAPGIKQGLVNPQSADF
AIAEMLALPEGPEVEYHCNSCAADCSKQRYHCQKQADFDVCSDCYNDGKFGPDMVSLDFI
KMDASEEENGVGSGWTDHETLLLLEALEMYGDNWNEIAEHVGTKSKSQCILQFIRLPVED
PFLEDMETPGTSLSVPDPPPNLKVDSTVQDAQTGEGKANAHAPSTEAGSEISGDLQAPPP
SFVAFADAPNPVMAQVAFLAAMVGPRVAAAAAQAALATLTQKDPGPRLAANTSTILDDPG
VHQPVSVQLPDRLVSADTEVQNNSDAIQLSTAETGSVGGTLVSRAEPGGPVLPKVELNVK
LNISEEAISSSHVNRAAANAMAAAAIKAKLLADQEEREMQRLVTIVIEHQLKKLELKLKT
FTDLETMLAKECESVERARQKIYTEHARMVASRLSTSSSLTPPTLVPGQQNSTAGYTFGP
GGQATPMYPAGSTSSFQGSNSTGSSPSPSLQGLARPVTAGAMSTQGQFVRQGMVGGVTPP
QLVGRSAMPQGVAPPSQSLGRPLMPNQTIHPQTPGRPLTAPPGMSRPAPGGTGSGPT
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaagcgtcagcctgtaatttcgggtgcttcgcccgctgggttgaagattaaa
ttgaggtctggagcagctgcagcaacaaagccaagcaaagggaatcagctagaagagagt
ggggaagatttgggagctgattctggggatgattccggaatgaacgaaggaattttgaaa
aggaagcggacatcaccacctccatcacaaatttctaataaaagacctgctatagaggat
tccccagtacccttggggcccaatggggagcctgtggaggtggtacccggcaagagtgaa
cgcgttgctggtgatcttaatgttgttaaacagcgcgtgggacaacctcatagctcagtt
ggagctatattacaagcagaacaatctgtgcagctgggtggtgatagagattatgaggaa
gcaaagaagaataatcctaatttagaaaacatatcgcatggacagctactagtaaattct
gttgcacctgctgatcaatctggagcttttcttttaggaagaaaagcaggcgcagaccca
gcaggatttggtcaacaaccacatttaatgcctattggcttgcagttgtcatcgggtatt
ccaggttccagaacgaatggtggcaccacagagcaacatattattcctagccatgcgggt
tggttttcatggactgaaatacaaactttggagaaaagaggtttgcctgagttttttaac
ggtaaaacgcctggcaagactccaaagctctacatggattaccgtaatgcaatcgtgaag
aagtatcgggagaatcttaaaaagatgatcactgttgccgatgttcaagagctgctcgtt
ggtttggacgaaaaaaccatatctcgaattctagattttctcgatcactggggtcttatc
aattatcaggtccctgctgaattacggccactatggcaaggtcctgtccttgctctagaa
cctgatgaagcaggcattttgcgtgcattgcctcgaaagggttctagtttgtacgagttt
gatagcatacgagctcctggtatcaagcaaggccttgtaaatccacaatcagcagatttt
gccattgcagaaatgctggctctcccagaaggaccggaagtggagtatcactgcaattct
tgtgctgctgattgtagcaaacagcgttatcattgtcagaaacaagcagattttgatgtg
tgctctgattgttacaacgatggaaaatttgggcccgatatggtatctttagatttcata
aagatggatgcttcagaggaagagaatggagttggtagcggttggacggatcacgaaact
cttttgcttctcgaggctctagagatgtacggagacaattggaatgaaatagctgagcat
gtggggacaaagtcaaaatcacaatgcattttgcagtttatacggcttcctgttgaggat
cccttcttagaggacatggaaacccctggaacgtctttgagtgtaccagatccacctcct
aacttaaaagtagatagcacggtacaagatgcacagaccggagagggaaaagccaatgct
catgcacctagtactgaagctggttcagagatttcaggggatctacaagcaccgcctcca
agctttgttgcttttgctgatgctcccaacccggtcatggcccaggtagcctttcttgca
gccatggttgggccacgagtggctgcagcagctgcacaggctgcactagctacgttgacg
caaaaggatcctgggccccgacttgcggccaacacctcaactatcctggatgatcctggg
gttcatcaacctgtctctgtgcaactgcctgacaggttagtgtcagcagatactgaagtg
caaaataatagtgatgcaattcaattgagcactgctgaaactggctctgttggtggaacc
ttggtctccagagccgaacctggtggcccagttcttccaaaggtcgaactaaatgtgaag
ttaaatatttctgaggaggccataagcagttcccatgtgaatcgggctgcggcaaatgca
atggctgctgctgctattaaagccaaacttttggctgatcaagaggaacgtgaaatgcag
cgtttagtcaccatcgttattgagcaccagctgaagaagttggaactgaagttgaagacc
tttactgatttagagacgatgttagcaaaagaatgtgaatcagtggagcgcgctcgacag
aagatttacacggagcatgcacgaatggtggccagtcggcttagtacaagctctagtctt
actccacccactcttgtaccagggcagcaaaattccactgctggttacacgtttggacct
ggcggacaggccacccctatgtatcccgcgggatccacgtccagctttcaaggatccaat
tccacaggttcttctccttccccaagtttacagggattagcaagaccagtgactgcaggc
gcaatgtcaactcaagggcaatttgtgagacaaggaatggtgggaggagtcacacctcct
caactagtggggcgatcagcaatgccccaaggagttgcacctccttcacagtctctcggc
agacctttgatgcccaaccagaccatccatcctcaaacccctggaagacccctcacagca
cctccgggaatgtcgcgacctgctccaggaggcacaggtagtggtccaacatag
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