Physcomitrium patens (spreading earthmoss): 112287819
Help
Entry
112287819 CDS
T01041
Name
(RefSeq) DNA mismatch repair protein MLH1
KO
K08734
DNA mismatch repair protein MLH1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03430
Mismatch repair
ppp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112287819
03460 Fanconi anemia pathway
112287819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112287819
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
112287819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
112287819
NCBI-ProteinID:
XP_024387048
LinkDB
All DBs
Position
10:complement(6089034..6096132)
Genome browser
AA seq
723 aa
AA seq
DB search
MGDAGGVAAPAPIKRLEEAVVNRIAAGEVIQRPASALKELLENSLDAGATSIGITIKDGG
LKLIQIVDNGHGIRYEDLPLLCERHATSKLQVFEDLEVISTLGFRGEALASITFVAHLSV
ITMTEGQAHGYKATYKDGQMQAEARPCAAVKGTQITVENLFYNVAARRKAFKNPNEEYGR
ILDVVSRYAIHKIGISFSCKKHGDSRADVHTVGSSSRTDTIRAVYGPGVARELIAISASD
DSPQGSTFQMDGLISSANYSSKRSSMVLFINDRLVECTALRKAIELVYATILPKASKPFI
YMSIHLPPEHVDVNVHPTKREVSFLNQESLVDTIQQAVEAKLLESNNSRTFSTQTLLPGA
SIAIIPREESSPSPSPPVITPQKAPVNKKVRVDSLNPQGRLHAFMHKKRSVTDEPSQMEN
DLAKTRRTVRQRRNPKESADLTSVQELLAAIDRQTHSGMLEIIKQCIYIGMADDVLALAQ
CKTRLYVLNVVNLSKELIYQQVLRRFAHFNVMHLSTSAPLMELLMIALDEEERMGRWCES
DGPKGQIAQLNVELLMCKAEMLKEYFSIEIDESGNLCTLPVVLDQYTPDMDRLPSFVLNL
GNNVDWESEKECFETLAAAMADFYAMHPPFLPNPNENEHSQTYCVSKSKQAATDEGSEEQ
AGGSDIDMRAEAETAWAHREWSIQHVLFPAMKLFLKPPMHMANDGTAVQLACLENLYKIF
ERC
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatgcgggaggagtggcagctccggcgccgatcaagcggcttgaagaggccgtg
gtaaacaggattgcagcaggggaggtcattcagagacccgcgtctgcattgaaagagctt
ctggagaatagtttggatgcgggtgcgactagcatcggcatcaccatcaaggacgggggc
ctcaagctcattcaaattgttgacaacggccatggcattcggtatgaagacttgcctctt
ctttgtgagcggcacgcaacatcgaaattgcaagtgttcgaggatctggaagtcattagt
actctaggttttagaggtgaagcattggccagcatcacatttgtggctcaccttagtgtc
atcaccatgacggaaggccaagcgcacggatacaaggcaacgtataaggatgggcagatg
caagcagaagctcgtccgtgtgcagccgtgaaaggaacacaaatcacggtagagaatcta
ttctacaatgtggctgctcggaggaaggctttcaagaaccccaatgaagaatatggtcgc
atactagacgtggtgagccgatatgcgatccacaaaattggtatcagcttctcgtgtaaa
aagcatggcgacagtcgagcagacgtacatacggtgggatcatcctcacgaacagatact
atcagggctgtttatgggcctggagtagcacgggagcttattgcaatttcagcatcagat
gacagtccacaaggctccactttccagatggatggtctaatttccagtgctaactatagc
tcaaagcggtcaagtatggttttgtttattaacgatcgactggtagagtgtaccgcattg
aggaaagctattgagttagtatatgcaacgatcttgccgaaggcttcaaagccctttatc
tacatgtctatacatttacctcccgaacatgttgatgtcaatgtgcatccaaccaagcgt
gaggtgagctttttgaaccaagaaagcttagttgataccatacaacaagccgtggaggcc
aagctgttggaatcgaacaacagtcggacgttttctacacagacgttacttccaggagca
tccatagcgattattccaagggaagaaagcagcccttctccatcaccaccagtgattacc
cctcaaaaagctcctgttaacaagaaggtgcgagtagactccttgaacccacagggcaga
ctgcacgccttcatgcacaagaaaagaagcgttaccgatgaaccctcacagatggaaaat
gacctggcgaaaaccaggcgtacagtcagacagcgccgaaaccctaaagagagtgctgac
cttactagtgtccaggagctgctcgctgccattgatcgtcagactcattcaggaatgtta
gagatcatcaagcagtgtatttacataggcatggcggatgatgtgttagctttagcacag
tgtaagacccggctgtatgtactgaatgttgtcaatctcagtaaggagctgatttaccag
caagtccttcgacgttttgcacatttcaatgtcatgcatctgagcacctccgctccttta
atggaacttcttatgatagcgctggatgaagaagagcgcatgggacggtggtgtgagtct
gatgggccaaagggtcagattgctcagttaaatgtggaattgctgatgtgcaaagcagaa
atgctcaaagaatacttctctatagagatcgatgagtcgggaaatctctgcacattacct
gtggttttagatcagtacactccagatatggatcggctaccgagttttgttttgaatctt
ggcaacaatgttgactgggaatctgagaaggagtgttttgaaacccttgcggctgccatg
gccgacttttatgcgatgcatccaccttttttgccaaacccgaacgaaaatgagcattct
caaacctattgtgttagcaaatccaagcaggccgcaactgatgagggatcagaagaacaa
gctggaggctctgacattgatatgcgagccgaggctgaaactgcttgggcgcacagagag
tggtctatccagcacgtgttgtttccagcgatgaagctttttctaaagcctccaatgcat
atggccaatgatggtactgctgttcagttagcgtgccttgagaatctctacaaaatattt
gaacgttgctaa
DBGET
integrated database retrieval system
