Physcomitrium patens (spreading earthmoss): 112287977
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Entry
112287977 CDS
T01041
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112287977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112287977
03029 Mitochondrial biogenesis [BR:
ppp03029
]
112287977
Membrane trafficking [BR:
ppp04131
]
Autophagy
Autophagosome formation proteins
ULK complex
112287977
Atg1 complex
112287977
Mitochondrial biogenesis [BR:
ppp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
112287977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
112287977
NCBI-ProteinID:
XP_024387454
UniProt:
A9S9Z6
LinkDB
All DBs
Position
1:complement(17773438..17777392)
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AA seq
824 aa
AA seq
DB search
MAPFGSTQSEKANVEQIVAEYYAKALHIILEARIPHVLGQGAGYGNSGEGNDSLYMIGGG
GGGRASNKWFNLELESSSHVQESVDAWRRGVCQEPMVVDILLHQPTGTMEVPSSSSGNAS
LERQRSFNKWSGSPQRVANLRGESWNEGNDGDSFTSAGVVSRTLLERWVVHYERTKKGSV
LGFGPVLAKQAPVEGGASLDEDISSIGRKQGGGPSTFPSNHVLESPVVYKRTVIMLRSLY
CLVRTLPAFRLFKLANFSSHSRSFSLSYTVSPAPSAVSEHDEDAMMKCSLTPIETQWGRL
CISSMYRNATAVTALEVTPRIMSRIIADYVGSPTTDPLRRFTSVGSLPSGGLSGRQGVHV
VTLPGSVPSSPSGAVGRRHSWSGGINKVQSQPPPLPISPSYKSSSPSPSHPSLDFQNLSP
KTPHFFHHSSSPSGTHAPSNLSPRNSPLQRGFVQPPSSHHPHLDSQPIPIHSRRSPPFSP
SPSPSPPQHGYPQNDFRLRCSSAPVSIPRPTNLNRPLTSTRAAPDTHHQSRSPLPPPSPQ
TRPLDLPRAISFNSRLHPGSGGHVSNFSLDSKNAARSSTAGDSLQGTPQNRFRGHQISLE
EQIEELSLSGIKRSVHSPPTLALGDVRASSKFSSPNREDPEEMHLECPFAIDNDDAEDYR
SRVGSPGVRPKVPDSPDFQGSTPGSAVGALVRILRGAAPLRQQSAPPAFTDLPVSRMGSA
PSSPVAITGRVKNSPPKPSSLGTRNSSLKGRLSQPGSLGGNTGPGSSFGTGVVGSPPSIG
FRQAISKTAADALEELRGYREMRDFLVRQSGGNSGNDRQVVNRV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgttcggttccacgcagagtgagaaggcgaatgttgaacagatagtggcagag
tattacgcgaaggccttgcatataattctggaggcgaggataccgcatgtgctggggcaa
ggggcggggtatgggaatagcggggagggaaatgactctttgtatatgatcggaggggga
gggggagggagggcgtcgaataagtggttcaatttggagttggagagctctagccatgtg
caggagagtgtggatgcgtggagaaggggagtgtgccaggagcccatggtggtggacata
ttgttgcaccagccgacggggacgatggaggtgccgtcgtcctcctcgggtaacgcgagt
ctggagcgacagcgcagtttcaataagtggagtgggtcgccgcagcgggtggcgaatttg
agaggggagtcgtggaatgagggcaacgatggcgacagcttcacgtccgcgggggttgtg
tcgaggaccttgcttgagaggtgggtcgtgcactatgagcggacgaagaagggttcggtc
ttagggtttgggcctgtgctcgcgaagcaggcgcctgttgaagggggtgcgtctttggat
gaagacatctcaagcataggtcggaaacaagggggaggtccttctacttttccgtccaat
catgttctggagagtccagttgtgtataagaggactgtgattatgctgcgctctttatat
tgtttggtgcgtactttgccagccttccggctattcaaacttgcgaatttctcgtcccac
agccggagtttctctctctcgtacaccgtctcccctgcaccttcagctgtatctgagcac
gatgaagatgcaatgatgaaatgcagtttaaccccaattgagactcagtggggcagattg
tgcatctcctctatgtacagaaatgcaactgctgtaacagccctggaagtcacccctcga
attatgtcgcggatcattgccgactatgtcggcagcccgaccactgaccctttgagaaga
tttactagtgttgggtcattaccttctggaggactttctggtcggcagggggtgcatgtt
gttactctaccaggttctgtgcctagttctccatccggggcagttggacgacgccacagt
tggagtgggggcataaacaaggtgcagtcgcagcctccaccactgccaatttctccctcc
tataaatcatcatccccatccccttctcatccgtctcttgattttcaaaacctttctcct
aaaacccctcactttttccaccattcgtcttccccgtccgggacacatgctccctcgaat
ctctcacctagaaattctcccttgcaaagaggattcgttcagcctccttcctctcaccat
cctcacttggactctcaacctatccctatacattctcgtcgctctcctcctttttcacca
tctccatccccttcaccacctcaacatggctatcctcaaaatgatttccggttacgatgc
agcagtgcccctgtaagtattccccgtcccactaaccttaaccgtcccttgactagcaca
cgagctgcgcctgatactcaccatcaaagcagaagccctcttccaccaccttctcctcag
actcgtcctttggatctacctagggcaatttcttttaattcccgtcttcatccaggatca
ggtggtcatgtctcaaatttttcactagacagcaagaatgcggctcgatcatctacagct
ggtgactcgttgcagggcaccccccagaatcgattccgcggacatcagatctccttagaa
gagcagattgaagaactttctctgtcaggcataaaacggtctgttcatagccctccaacg
cttgcactaggtgacgtcagagcctccagcaagttttcaagccccaatcgtgaggaccca
gaggagatgcatttagagtgcccatttgcaattgacaacgatgacgcggaggattatcgg
agcagggttgggagtccaggtgtgagaccaaaggttcctgattcgcccgacttccaggga
agcaccccagggtccgctgtaggggccctagtcaggattctgaggggtgcagctcctctg
cgccaacaaagcgccccacctgccttcacagatcttcctgtttcaagaatgggctctgct
ccttcatctcctgttgcaattacaggcagagtcaagaatagtccacccaaacccagctcc
cttggcacgcgcaatagcagcttgaagggacgactaagccaacctggcagtttgggaggc
aacacaggaccaggatcgtcgtttggcaccggagtggttggctctccaccatcaataggg
tttagacaagccatttcgaaaaccgccgccgatgctctggaagagttgcgggggtaccga
gaaatgcgcgattttttagtgcgtcaaagtgggggaaattcagggaatgaccggcaagta
gtgaatcgtgtgtaa
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integrated database retrieval system
