Physcomitrium patens (spreading earthmoss): 112288168
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Entry
112288168 CDS
T01041
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppp03009
]
112288168
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112288168
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
Pre-60S particles
Helicases
112288168
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
112288168
NCBI-ProteinID:
XP_024387826
UniProt:
A0A2K1JSW3
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All DBs
Position
11:159388..163967
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AA seq
630 aa
AA seq
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MAAVRGTIAFRNLKPPVSDETLQVLDSFGFHTATPVQASTIPLLSTYKDVAVDAATGSGK
TLAFLVPMVEILRRLTDPLKAFQVGAVIVSPTRELASQIYHVLGPFLTTLRGVQAMLLVG
GTDVTAEVAKLKQTGANVLIGTPGRLYDIMERVTALDFKNLEVLILDEADRLLDMGFQRQ
LTAILGHLPKQRRTGLFSATQTEAVVELARAGLRNPVRVEVRTQAKAQAADTESFQSKTP
SGLTLQYLICEGDEKPSQLVHFLCQHRQNKIILYFMTCACVDYWAIMLPQLESLSGLQAV
ALHGKMKQAAREKALAMFSGMTAGLLVCTDVAARGLDIPGVDWIIQYDPPQDPNVFVHRV
GRTARMGQSGDALVFLLPKEDAYVEFLRIRKVPIEERPKCSSVPNIVSVLRGAAAKDRDI
MEKGLRAFVSYIRAYKEHHCTFIFKWKQLEAGLAAMGFGLLQLPSMPELKRNVLSIAGFQ
PAKGIDVSSIAFKEKAREKQRQKNLANKPPRQPREPEPDRAPKKERKETAEKRRLHQKVE
DDEEMNREYRLLKKLKKGTLSESEYEQVMSMPDMQLVEPSSNVDEVQDSTHLNGRGSDSK
LSKRFARSTSRSQSKFKNRSVASTSKKRQA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggttagaggcacaattgcatttcggaacttgaagcccccggtctcggatgaa
actttacaggtcttggactccttcggattccacacagccacccctgttcaagcctccacc
ataccgttgttgagtacctataaggacgttgctgtggatgctgctacgggatccggaaaa
acgcttgcatttttggtacccatggtagagattctgaggcgcttgaccgatcccctcaaa
gcttttcaggttggtgctgtaattgtgtctcctactcgggagttagcgtcgcaaatttat
catgtattaggaccattcttgacgacattacgtggcgtacaagcgatgcttttagtaggt
ggaactgatgttaccgctgaggttgcaaagctgaagcagactggtgcgaatgtgctcatc
ggaacccctggacgattgtatgacattatggagcgcgttactgctctggatttcaagaac
ctcgaggttttgattttagatgaagcggacaggcttctggacatgggatttcaaaggcaa
ttgacagcaattttaggccatttacccaagcagcgtcgaacgggtctgttttctgccacg
cagacagaagctgtcgtggaactagcgcgggctgggttacggaatcctgtccgtgtggaa
gtgcgcactcaggctaaggcacaagctgcagatacagagtcctttcagtctaaaacaccc
agcggccttactttgcagtatctcatatgtgaaggagacgagaagccgtcacaactggtg
catttcttatgtcagcatcggcaaaataaaatcatactgtactttatgacgtgtgcttgt
gttgactactgggctatcatgctccctcaattggagtctctgtcgggcctacaagctgtt
gcgcttcatggaaagatgaaacaggcagctcgagagaaagcacttgcaatgttttctggg
atgacagcaggtttgctggtgtgtaccgatgtggctgcaaggggtcttgatattccaggt
gtcgattggatcatccagtatgatcctccacaagacccaaatgtgtttgttcatcgtgtg
ggtagaactgctcgaatgggtcagtctggtgacgcgcttgtgtttcttttaccgaaggaa
gatgcatatgtggagttcctacgtattcgaaaagtgcctatagaagagaggccgaaatgc
agttcagttcccaacattgtgtctgtgttgcgtggagctgccgctaaagacagggacatc
atggaaaaaggattacgggcttttgtatcttacatacgagcttacaaagagcatcattgc
actttcatatttaaatggaagcaactggaggcagggctggcagccatggggtttggactt
ttgcagctgccatccatgcctgagctaaagagaaatgtgctgtcaatagcggggtttcaa
cctgccaaaggaatcgatgtgtcttctatagcatttaaggaaaaagccagagaaaagcag
cgtcaaaagaatctggcaaataaaccaccacgacagcctagggaaccagagccagaccgt
gcacctaagaaggagcgaaaagagacagctgaaaagcgacgcttacaccaaaaggtagag
gatgacgaagaaatgaaccgggagtaccgacttctgaaaaagttgaagaagggtactttg
tccgagtcggagtatgagcaggtcatgagcatgccagatatgcaattagtagaacctagt
agtaatgttgatgaagtacaagatagtacccatttgaatggtaggggaagtgattctaaa
ttatctaaaagattcgcacgatcaactagtaggtctcaaagtaagttcaagaacaggtca
gttgctagtacttccaagaagcggcaagcatag
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