Physcomitrium patens (spreading earthmoss): 112288219
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Entry
112288219 CDS
T01041
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112288219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112288219
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112288219
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR5
WD40_Prp19
Beta-prop_IFT140_1st
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_CAF1B_HIR1
eIF2A
Tricorn_2nd
Beta-prop_WDR36-Utp21_2nd
BCAS3_WD40
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
112288219
NCBI-ProteinID:
XP_024387964
UniProt:
A0A2K1JV62
LinkDB
All DBs
Position
11:12058465..12062768
Genome browser
AA seq
466 aa
AA seq
DB search
MPGVPAIGEYTVCEINRDFLTAKDDIDKSAQDSYCKILGRVYPSIPYQPRDSDARNSQGE
GEDGGPIDEDADQLNTTDSEPSGFLGRQLENAKTLVSTALQNLLSQNSHGAQKSYSFQGI
SWHMHRHWVAFIGGQDQVFVHDFEDAAPRDPAVLANDVHKDIECVEWRPSAGSTLSIACR
GGIAIWSANYPGNMAPVRAGVVSILGTPNRGAGARWALVDFLRTGSNAPVTALSWSPCGR
MLASASKHDSTFTIWDVAQGVGTPLQRGLGDISLLKWSPTGDYFVSAKVNGVFHLWETSK
WTSVPWTSAGGSVVSAMWSPDGKVLLAAFDQTTSLAALHFAGKPPSLDVHLLPLDLPDIE
AITGRNGAIERMAWDGTGERLAVTYSRAVNANHAGLVAVFDTRQTPIVSTSLLGFIRGPG
VDSKPISLAFHNNLKQGALLSVCWSTGVCCTYPLLFRGHGGQLVRA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgccgggggttccagcaattggagagtacaccgtctgcgagatcaatcgcgatttcctg
actgcgaaagatgacattgataaaagtgcgcaagactcttactgcaaaatcttgggtcgc
gtgtatcccagcattccgtatcagcctagggattcagatgcacgtaatagccaaggtgaa
ggggaagatggaggcccaattgatgaagacgcagatcaactgaatacgactgatagcgaa
cccagtggatttcttggcaggcaattagaaaatgcaaaaacgcttgtgtctacagcgttg
cagaatctactttcgcaaaattcccacggcgctcagaaatcatattcatttcaagggata
agctggcacatgcaccgacactgggttgcgttcattggaggccaggatcaagtctttgtt
cacgattttgaagatgcagctccaagggatccagctgtactcgcaaatgacgttcataaa
gacatcgagtgtgtggaatggaggcccagtgctggttcgactttatctattgcctgcagg
ggaggaattgctatatggagtgctaattacccaggaaatatggcacctgttcgggccggg
gttgtctccatcctcggtacacctaaccgaggcgctggggctcgctgggcgcttgtcgac
tttttgcgaactggtagcaatgcgcctgttacagcgttatcgtggagcccttgcggcaga
atgctagcatcagcttcgaaacatgattcaacctttaccatctgggatgtggctcaaggt
gtggggacgcctttgcagcgtggccttggtgatatttctttgctgaaatggtcgcctaca
ggagattatttcgtctcagccaaagtcaatggggtatttcatctctgggaaacaagcaag
tggacatctgtgccatggacatcagccggtggatctgttgtgagcgcgatgtggagtcca
gatggaaaagttcttctggcagcttttgatcaaacaacttctttggctgctcttcacttt
gccggcaaacctccctctctggatgtacacctgcttcccttggatttgccagatattgaa
gccataactggcagaaatggtgcaatagaaaggatggcgtgggacggcactggggagagg
ttagcagtcacctacagcagggctgtaaatgctaaccatgctggattagtggctgtcttt
gatactcggcagacacctatagtatcgacatcgttgctgggctttatacgcggccctggc
gtggattcaaaacctatttcactcgctttccacaacaacttgaagcagggtgcacttttg
tcagtgtgctggagtacgggagtttgttgcacatacccgctgttgtttagaggacatggt
ggacaactcgtgcgagcttag
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