Physcomitrium patens (spreading earthmoss): 112288231
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Entry
112288231 CDS
T01041
Name
(RefSeq) tubulin alpha chain
KO
K07374
tubulin alpha
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04145
Phagosome
ppp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112288231
09142 Cell motility
04814 Motor proteins
112288231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112288231
03036 Chromosome and associated proteins [BR:
ppp03036
]
112288231
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppp04812
]
112288231
04147 Exosome [BR:
ppp04147
]
112288231
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112288231
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112288231
Cytoskeleton proteins [BR:
ppp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112288231
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112288231
Exosomal proteins of other body fluids (saliva and urine)
112288231
Exosomal proteins of colorectal cancer cells
112288231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
DUF7281
Motif
Other DBs
NCBI-GeneID:
112288231
NCBI-ProteinID:
XP_024387987
UniProt:
A9RIJ5
LinkDB
All DBs
Position
11:complement(9116561..9118829)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECLSIHVGQAGIQIGNACWELFCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
HVPRCVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALD
RIRKLADMCTGLQGFMVYHAVGGGTGSGLGSLLLERLSVDYGKKTKLSMCIFPSPQVSGA
TVEPYNSILSCHGLLEHTEVSVMYDNEAIYDICRRSLDIERPTYTNLNRLITQVMSSLTA
SLRFDGALNMDLTNFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVSELSNSVFEPSS
MMAKCDPRHGKYIACAMMYRGDVVPKDVNAAVGTLKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRALCMISNSTAVAEVFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGADSTEDDGEDEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtgcctttctatccacgttggtcaagccggcattcagatcggcaacgcgtgt
tgggagcttttctgtctcgagcacggtatccagcctgatgggcaaatgccaagtgacaag
acagtgggaggaggagatgatgccttcaataccttcttcagtgaaacgggagcgggaaag
catgtgcctagatgtgtcttcctggacttggagcccactgtgattgatgaggtgaggact
ggcacgtaccgccagctctttcaccccgagcagctcatcagtggcaaggaagatgccgcc
aataactttgctcgagggcactacaccattgggaaagagattgtggatctggcgctggac
agaattcgaaagctggccgacatgtgcactggtctgcagggattcatggtctaccacgca
gtcggtggcggcacaggctcaggcctcggctccctgctcctggagaggctgtcagttgac
tacggcaagaaaaccaagctttccatgtgcatcttcccaagcccacaagtttctggcgca
accgtggagccttacaacagcattttgtcatgccatggcctcttggaacacacagaagtc
tcggtgatgtatgacaacgaagccatatacgatatatgtcgaaggagcttggacatagag
cggcccacgtacacgaacctgaacaggctaatcacgcaggtgatgtcgtcattgactgcc
tctttacgattcgacggagcactcaacatggacctcaccaacttccaaaccaatctggtg
ccatacccgagaatccacttcatgctctcctcgtacgcccccatcatctctgcggagaaa
gcataccacgagcagctgtctgtgtcggagctgagcaacagcgtgttcgagccatccagc
atgatggcaaagtgcgatcccaggcatggcaagtacatcgcctgcgcgatgatgtaccgg
ggagatgtggtccccaaggatgtgaatgcagctgtgggcactctcaaaacgaagcggacg
atccagtttgtggactggtgcccaactgggttcaaggtgggtatcaattaccaacctcca
acggtggtgcctggcggggacttggccaaagtgcagcgagcgttgtgcatgatctccaac
agcacggcggtggcggaggttttctcacgcctggaccacaaattcgacctaatgtatgcg
aagcgggctttcgtgcactggtatgttggtgaggggatggaagaaggcgaattctcggag
gcgagggaggatttagcagctctggaaaaggattacgaggaggtgggtgcggattcaacc
gaggatgatggcgaggacgaaggcgaggaatattag
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