Physcomitrium patens (spreading earthmoss): 112288571
Help
Entry
112288571 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112288571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppp03000
]
112288571
Transcription factors [BR:
ppp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
112288571
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
112288571
NCBI-ProteinID:
XP_024388632
UniProt:
A0A2K1JVL4
LinkDB
All DBs
Position
11:complement(14290762..14295528)
Genome browser
AA seq
552 aa
AA seq
DB search
MVVMKPVNVRGVADDRMERLAHPEGFSPAGLKVLVVDDEPLALMIVERMLQICQYTVTTC
NSATKALAMLRENRNYFDLVISDVYMPDMDGFKLLEAIGLELDLPVIMMSGDGETDSVMK
GIRHGACDYLLKPVRLKELINIWQHVVRKLVTPRDIPKEESGEWDEFPKHQDNADFDSTA
RKRKERSEDVAQLVEDVNNLKKARVVWSAELHQQFVNAVNYLGVDKAVPRKILDIMNVQG
LTRENVASHLQKYRLYLKRLIGVTPQPYPVASFQAAENGTFGGTMQIQPGGRPAASTSTK
GLNLGGGASNSSIGGLSRSGVQIDAATLNALVQLQSLQQQKQLGPTAARSGLTTDVVNSQ
IPADPTGLQRLDSFELDLLMKTQHDASRQRGSGGSTDLADLLNCSKDALPYMSNLRGQCE
LKPAVMGSTNPLVGSEPMTAMSMSNLRGVDDGGPSLGSTEAGRSHMVNKLGRDFSNSSPA
FFSSTSRSNGGAVSDSSFSTNYGDIPDGPPSFLVASPPDLSLLGQLQAFDQVEFDYGQLS
QPRRSMSYSSKT
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgatgaagccggtgaacgtgagaggagtggcggacgatagaatggaacggctg
gcgcatcccgaggggttctccccggcggggttgaaggtgctggtcgtagatgacgaaccg
ctggcgctcatgattgtcgagcgcatgttgcaaatttgccagtacacggtgaccacatgt
aatagtgccactaaggccctcgcaatgctgcgagaaaaccgcaattattttgacctagtc
ataagcgatgtttacatgccagacatggacggttttaagctccttgaagcgattgggctg
gagttggatttacctgtgataatgatgtcgggagacggagaaaccgattctgtcatgaag
ggaatcaggcatggtgcttgtgattatctcttgaaacctgtccgccttaaagagctcata
aacatctggcaacatgtggtacgcaagcttgttacaccaagagatattccaaaagaggaa
tcaggagagtgggatgagtttccaaaacatcaggataatgcagattttgattcaacggca
cgcaagagaaaggagaggtcggaagatgtagctcaacttgtggaggatgtgaataatttg
aagaaagctcgcgttgtctggtctgcggaactacatcaacagtttgtcaacgccgttaac
tacttgggtgtagacaaggctgtgcctaggaagatactagatattatgaatgttcaagga
cttacacgggaaaatgtggcgagtcacttgcaaaagtaccgattgtacttgaagcggttg
attggggtgacaccacagccgtatcctgtagcctcatttcaggccgctgaaaatggtacc
ttcggggggactatgcaaatacaaccgggggggcgccccgcagcctctaccagcacgaag
ggtctaaacctcggtggtggtgcatcaaattcttccataggtggattaagccggagtggg
gtacaaattgatgctgctacactgaacgcgttggttcagcttcaaagtcttcaacaacaa
aagcagcttggtccaactgctgctcggagtggcctaaccacagatgtcgtgaactcgcaa
atcccagctgatccgacagggctccagaggctggattcttttgaacttgacctcctgatg
aagactcaacatgatgcgagtcggcagcgaggtagtggtggtagtacggatctcgcagat
ttgttgaattgtagcaaggatgctctaccttacatgagcaacttgagaggacagtgtgaa
cttaagcctgctgtcatgggctctacaaatcccctcgttggtagtgagccaatgacagcc
atgtcaatgagtaacttgcgaggtgttgacgacggtggtcccagtttgggaagcacggaa
gcaggaagaagtcatatggtgaataagttgggtagagatttttcgaactcatcgccagcg
tttttctcatctacatcgcgaagtaatggtggtgccgtctcggacagtagcttcagtacc
aactacggtgacattcctgatgggcctcctagttttctggttgcgtcacctccagatttg
tctctcttggggcaactacaagcctttgatcaagtagagtttgattatggccaattatcc
cagcctcgacggtcaatgtcatactctagtaagacgtag
DBGET
integrated database retrieval system
