KEGG   Physcomitrium patens (spreading earthmoss): 112288608
Entry
112288608         CDS       T01041                                 
Name
(RefSeq) coatomer subunit alpha-1
  KO
K05236  coatomer subunit alpha
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ppp04131]
    112288608
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppp04147]
    112288608
Membrane trafficking [BR:ppp04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    112288608
Exosome [BR:ppp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   112288608
  Exosomal proteins of bladder cancer cells
   112288608
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 WD40_CDC20-Fz Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_Nup120_160 DUF6956
Other DBs
NCBI-GeneID: 112288608
NCBI-ProteinID: XP_024388740
UniProt: A0A2K1JUI4
LinkDB
Position
11:8189839..8195864
AA seq 1215 aa
MLTKFETKSNRVKGLSFHPRRPWILASLHSGIIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKMRRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHIKEDLVVSASLDQTVRVWDIGALRKKSVAPAVDMLR
LTQMNTDLFGGGDSVVKYVLEGHDRGVNWASFHPSLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHVNNVSCVMFHARQDIIVSNSEDKSIRVWDMSKRTGVQTFRREQDRFWILSAHP
EMNLLAAGHDSGMIVFKLERERPACAVQGDTLYYVKDRNLRTYDFAGRDNTLISIRRAGS
TGLNQGPRTLSYNPAENAVLLCSDVDGGSYELYIIPKEGTGRSEAAHEAKRGLGSSAVFV
ARNRFAVLDKNQNQVLIKNLKNELTKKVTLPSPSTDVIFYAGTGNLLCRSEDKVVLFDLQ
QRATLAEVSAPLVKYVVWSSDMENVALLSKYVIVMATKKLVPKCTVHETIRVKSGAWDEN
GVFIYTTLNHIKYCLPNGDSGTIRTLDIPVYITKVGGNSIYCLDRDGKNRVIQIDSTEYT
FKLALIQRKFDQVLQMIHSLQLCGQSIIAYLQQKGFPEVALHFVKDEQTRFNLAIECGNT
GVAVASAKEIDQKECWHRLGVEALRQGNHEIVEYAYQKTKNFERLSFLYLITGNVEKLGK
MLKIAEMRNDVMGRFHNALYLGDVQERVRILEESNQLPLAYATAKAHGLIEVADELEQQL
GDNVPSLPEADRSVLLIPPRPILQENNWPLLVVSKGYFEGAFTDAAGPGDVEEDDGAAGA
WGADIDIVEPDEALNREGVFVADEEGRGDDEEGGWEMEDLDIPADANVPEVAPNAAYFVT
PTGGVPKSQNWIQNTSLAGEHAAAGSFDPAMRLLNRQLGIQNFKPLKNVFLELHLANQSL
LPTLVSVPALSLYLERGWSDSLPVNAKGSPAVLTKLSSLEEKLKVAYKTTTEGKFTDALR
LFLDILHTIPVVVVDSRKEVDEVKELLGIAKEYTLALRIELKRKDPALKDDLLRQSELAA
YFTHCQLQPTHLKLSLQSAMSICFKAKNYYTAGSIARRLLELSLSPNVARTARQVLQVCE
KNPRDEMKLNYDPRNPFVVCGATYSPIYRGSKDVSCPYCKARFVPETLHKLCPVCDLAVV
GADASGLLCSPSQMR
NT seq 3648 nt   +upstreamnt  +downstreamnt
atgttgactaagttcgagacgaagagtaatagggtgaaggggctcagctttcacccgcgg
cggccatggatcctggccagtttgcacagcggtatcattcagctgtgggactaccgaatg
gggacgcttatcgaccgattcgatgagcacgacggaccagtgcgtggtgttcacttccac
aagtcgcagcctctgtttgtctccggaggggatgactacaagattaaggtgtggaattac
aagatgcggcgctgtttgtttactttgttgggtcatttggactatatccggacggtgcaa
ttccaccatgagaatccttggattgtgagtgcaagtgatgatcagacgattcgcatctgg
aactggcaatcacgcacatgcatttctgtactcactggtcacaaccactacgtgatgtgc
gcatcgttccatattaaagaggatttagtggtatccgcatcattggatcagactgtacgt
gtttgggatattggagcattgaggaagaagtctgtggctccagctgtagacatgcttcgc
ctcacgcagatgaatactgatctttttggaggaggtgattctgttgtgaagtatgtgcta
gaaggtcacgacaggggagtcaattgggcatcgtttcatccttccttgccgcttattgta
tctggagcagatgatcgtcaagtgaagttatggagaatgaacgatactaaggcgtgggag
gttgataccctgcgaggtcatgtgaacaatgtttcctgtgtcatgtttcacgcccgtcaa
gatattatcgtgtcaaattccgaggacaagagcatccgtgtgtgggatatgtctaagcgc
acaggtgttcagaccttccgaagagagcaggataggttctggattctttcagcacatcca
gagatgaatcttcttgcagctggtcatgacagtggaatgatcgtcttcaagttggagaga
gagaggcctgcttgtgctgttcagggagacactttatactatgtgaaggaccgtaatttg
cgcacttatgattttgctggcagagataacacccttatctctattcggcgagcaggttcc
acgggtctgaaccagggacctcggaccctctcgtacaacccagcggagaacgcagtattg
ctctgttctgacgttgacggtggttcttacgagctctatattatccccaaagagggcacg
ggcaggagtgaggcagctcatgaggctaagcgtgggttgggctcgtctgcggtctttgtg
gcaagaaacagatttgctgttctcgacaaaaaccagaaccaggttctcatcaagaacttg
aaaaatgaattgaccaagaaagtcactctgccgtctccaagcacggatgtgatcttctat
gcaggaactgggaacctgctttgtaggtcagaggacaaagttgtgcttttcgatctgcag
cagcgtgccacattagcagaggtcagcgctcctttagtgaagtatgtggtgtggtcaagt
gacatggagaatgttgcactgctaagcaaatatgtcatagtcatggccactaagaagctt
gtgcccaagtgcacggttcatgagactattcgtgtgaagagtggagcatgggatgagaat
ggtgtattcatatataccaccctcaatcacatcaagtactgcttgccaaatggagatagc
gggacaatccgaactctagatattccagtgtacatcacgaaagttggcggaaactcgatt
tactgcttggaccgcgatggcaagaaccgagtgattcaaattgattctacggagtacacc
ttcaaactagcactcatccagcgcaagtttgaccaggtgttacaaatgatccatagcttg
cagctctgtggacagtccataattgcatacttgcaacagaagggtttcccggaggttgct
ttgcactttgttaaggatgagcagactcgcttcaacttggccatcgagtgtggcaacact
ggagtggcagtggcatcagcgaaggagattgaccagaaggaatgctggcaccgtcttggt
gttgaggccctgcgccagggcaatcacgagattgtggagtatgcatatcagaagacaaag
aactttgaaaggctttctttcttgtatcttataactggcaacgtggagaaacttggaaag
atgctgaagattgcagagatgcgcaatgatgtcatgggccggtttcataatgccctctac
cttggggatgttcaagaaagagtgaggattttggaggaatccaaccaactgcctttggcg
tatgccaccgccaaagctcatggattgattgaagttgctgacgagttagaacagcaactt
ggtgacaatgttccttcccttccagaggcagatagatcggttttattaatcccccctaga
cccattcttcaggagaacaactggcccttgctggtggtcagcaagggctacttcgagggt
gcttttacagatgctgctgggccaggtgacgtggaagaagatgatggagccgccggagct
tggggagcagatatagacattgttgaaccagacgaggctctaaatagagagggggtgttt
gttgctgatgaagagggcagaggtgacgatgaggagggaggttgggaaatggaggattta
gatataccagctgatgcgaatgtgccagaggttgcacctaatgctgcctacttcgttact
ccaaccggaggggttccaaagagtcaaaattggattcagaatacttctcttgcgggagaa
catgcagctgctggctcttttgacccagcaatgagattgttgaatcgtcagcttggaatc
cagaactttaagcctttgaaaaatgttttcttggaactccatcttgctaaccagtctctt
ctacctactctagtatcagtgccagctctgtccctgtatttggagagaggttggagtgac
agtttaccagttaatgcaaagggatcaccagctgttttgaccaagctttcctctcttgaa
gagaagcttaaggttgcatacaagacaactactgagggcaagttcaccgatgctctgcgg
ttatttcttgatatcttgcatacaatccctgtcgtagtggtggactcacgcaaagaagtt
gacgaagtaaaggaacttctgggaatcgcgaaggagtacacacttgcacttcggatcgag
cttaagagaaaagatcctgctttgaaagatgatttactacgccaatctgagcttgctgct
tactttacacactgtcaattacagcccactcatttgaagttgagtttgcagtcagctatg
tctatatgtttcaaggccaagaattactacacagctggatctattgcgcgaaggttactt
gaactgagcttgtctccaaatgtggccagaacggctcgccaggtcctccaagtgtgtgag
aagaatccaagggatgagatgaagctgaattacgatcctcggaaccctttcgtcgtgtgt
ggggccacctacagccccatttaccgtggcagcaaggacgtttcgtgtccttactgcaag
gcacgatttgttccagaaaccctccacaagttatgccctgtttgtgatcttgctgtggtc
ggggcggatgcttcaggtctactctgctctccttcccaaatgcggtaa

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