Physcomitrium patens (spreading earthmoss): 112288614
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Entry
112288614 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13210
far upstream element-binding protein
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112288614
03041 Spliceosome [BR:
ppp03041
]
112288614
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112288614
Spliceosome [BR:
ppp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112288614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
KH_NusA_2nd
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
112288614
NCBI-ProteinID:
XP_024388755
UniProt:
A0A2K1JV47
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All DBs
Position
11:11818793..11823566
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AA seq
577 aa
AA seq
DB search
MAHDGEVVATENREEQTPRSEKKRKFDDTADNEEPVLGNTNGNSLDGGESGPAPVVSYNN
VPPPLSEFEIAKQKAAQIAARLVGAEAKRPRTEETSAEDHSAPVRPNGLDLGETFADDNS
KHNHEQPPEENSSFHQFQQHQEYQQHNPQQFHQPAHLDSQQYHQPPQHGSHQYYNQGGPH
ESRKIEVPNSKVGLVIGKGGETIKYLQHQSGARIQVARDGESDPRSSTRQVELMGTPEQI
SRAEQLVKDVIAEQASTGAPGGAFGGRSFGGHGGEQVQIKVPNNKVGLIIGRGGETIKSL
QSRSGARIQVQNDSETEPGATERVVTLIGIKKVTDMAYELIKEVIDENRTSRPPGGYNLQ
YGSGYRPSGPQQWGPPGAPPPYGYQQPAHYPGPPQPYPQAPPQAYGQFSQQPPGVYSSGW
EQRSPASATQAQQQSSYDYYGQQNQQAHQPPQGATNPPNSAGYNQQSYYQGYQQQSAQAQ
TYGDPATTYSQQSYSQQAYVQPPYSGYSYAPPAQGDQQSYGQQGYPAYGQSQTGYTATSG
ETTAPPATSGYDYNSAAAGSVPAVPGSQPPAVSATQS
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggctcacgatggcgaagttgtggccacggaaaatcgcgaggagcaaacccctcgctcg
gagaagaagcgtaaatttgacgatacggcggacaacgaggagcctgtgcttggtaacacg
aatgggaacagcttggacggtggagaatcaggccctgcccccgtcgtttcgtataataat
gtgccaccgccgctttcagagtttgagatcgcgaagcagaaggctgcccagatagccgcg
aggttggtcggggctgaggccaagcggcctcggacggaagaaactagtgcggaggatcac
agtgcgcctgtgcgcccgaatggcttggatctgggcgaaacctttgctgatgacaattcc
aagcataaccacgaacagcctccggaagaaaattcttctttccatcagtttcagcaacat
caagagtaccagcaacataatcctcagcagtttcatcaacctgctcaccttgattctcag
cagtaccatcagcctcctcaacatggttctcatcagtattacaaccaaggcggtcctcat
gaatcaagaaagatcgaggtgccaaattctaaggttggacttgttattggcaagggaggc
gagaccatcaagtacttgcaacatcaatctggtgctcgtattcaagtggcaagggatggt
gagtccgatcctcgctcgtcaacacggcaagtagagcttatgggcacccctgagcagatc
agtagagcggagcagcttgtgaaagatgtcattgctgagcaggcctccactggggctcct
ggcggtgcattcggtggtcgtagttttggcggtcatgggggagagcaagtacaaattaaa
gttccgaacaacaaggttggattgatcattggaagaggtggggagacgattaaaagcctt
cagagtcgttccggagctcgaattcaggtgcaaaatgactctgagactgagccaggggcc
accgagagggtggttacgctcataggaatcaagaaggttactgatatggcgtatgaattg
attaaggaagtaattgacgagaatcgtacctcaagacctccaggtggctacaacctacag
tatggttctggatacagaccctcagggcctcagcaatggggtccaccgggtgcccctcca
ccttatggataccagcagcctgctcattatcctggtcctccccaaccatatccgcaagca
cccccccaagcttatggtcaattttcccaacaacctcctggcgtttattcttctggttgg
gagcagcggtcacctgcatctgctacacaggctcaacaacaatcatcttatgactactat
gggcagcaaaatcagcaggcacatcaaccgcctcagggtgcaacaaatcctcctaattct
gctggctataatcagcaaagttactaccaaggttaccagcaacagtctgctcaagctcaa
acatacggtgatccggctacaacatacagtcagcaaagttactctcagcaggcatatgtc
caaccaccttacagtggatattcatatgctccgcctgctcaaggtgaccagcaatcgtat
gggcaacaaggatatcctgcttatggacaaagtcaaactggctacactgccacatctgga
gagacaacagctccacctgctacaagtggctacgattataattcagctgctgctggaagt
gtgcctgccgttccaggtagtcagcctccagccgtatcagccactcaaagctag
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