Physcomitrium patens (spreading earthmoss): 112288634
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Entry
112288634 CDS
T01041
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3 isoform X1
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ppp03012
]
112288634
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112288634
Translation factors [BR:
ppp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112288634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DSRM_DHX29
HA2_C
Helicase_C
RWD
UBA_DHX29
DEAD
HA2_N
dsrm
UBA
AAA_22
zf-Di19
zf-C2H2_4
GAGA
Dicer_dimer
FOXP-CC
zf-C2HC_2
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
112288634
NCBI-ProteinID:
XP_024388808
UniProt:
A0A2K1JUG9
LinkDB
All DBs
Position
11:7717682..7726528
Genome browser
AA seq
1576 aa
AA seq
DB search
MSGTGKKPARHVYKTGAAGCGGKAAPTSAKNTGQPLPCPFCDRIFKQDGRLKEHLKNKHA
DEENQESELSVDVNNVEQQASSSEPVQNPQRDEHGYPIKSPKTLLHEWCQKNKKPQPKFK
AVEVEGGGFHCRVILPDDKKSEADVILWYRREPTRTSMEAQHRASVMALYHIMGNRRLDR
ILGEDYRQLWFDLEKAAEERKEYLKLHPPQPRQKPAPVQRELHSVFMSEGNRRLVEDIIR
GSGTSDNVASTPSVEQDLNVDGGVFKDLDEDAASTWEDITEPETSGRKVDHPQKYAHTKG
AAPKLHFKEKNLSRKSSERKAMEQRSVDVPPKERLRSQLQRYGFKPHHVNAALTERDELS
SALDWLVLHVPENELPPKFAAESSMMSVQVLVRGKQVPDKAQGTFANMSSQSVAHLQEYG
YSDVDCIEALVVAKGDESIALGSLFRTLIGSQSDNSREIGDDGTPESIAEMREEELIVLQ
SIFEEENISLSENVITFNLSLEETVDATLHMEVRIPPESRYPYETPILAFRSSDLPSAFL
LELTKKVGKVASQMSRPMLYDLFSTAAELTVSLLPEYLSHGDHTSILTGDPDWDQLSESE
PDLGSKLFLKVDESITGNSKGNSINASMDNPDNQSRTYVPPGLRKPQNNQGDLLSSQQAD
DICTNAGKNSRARGRTGRKVLRDHDEEQELGGEEYKVDAADVRVESDKLKEEWELWQKSR
KDQELRGVRARLPAHKYRGDLLDAINGSFVTIVCGQTGCGKSTQVPQFVLEDYIEKNKGG
ECNIICTQPRRISAIGLADRVSKERGQAVGVTVGYSVRLDSCRSKRTRLLFCTTGILLRR
LLSDPNLTGVTHVIVDEVHERSLESDLLLLFLRQFLNRPQNTLRMILMSATVDAGVFANY
FKKSGSYAPPVVNIPGFTFPVRELYLEDALEMTGYRVGRNSRYALRKKLAQGEVSTTAAL
KPQIRGAAVLAGDLESWEDVLDEKEASDCIGIESYSESTQQSLKIVDQSIINFELIETLI
CSILEQEANPSTMYGRLTSLEEETESRHARSLTSTSGQKENVGAILVFLPGMLEIRKLQQ
RLQSSHQISALGLGGLWVLALHGSLSGEEQKRVFKKPPSGIRKVVLATNIAETSITIDDV
VYVIDTGRHKEMRYDHNRGLSCLEDTWISKANAKQRRGRAGRVRPGCCLRLFSRQQFENF
EEQQLPEMLRVSLEGLCLRVKTLMEGKVMEVVSQMLTPPSFEAVRTSLKSLEDLSALDKA
ERLTPLGQHLARMPVDARVGKMLIFGCMLKCLDPILTIAASLSGRSPFMSPMERREEAAA
ARMKLAGNSKSDHMAIAAAYNGWTSAKNDGWGSENEYCQANFLSRETLSGIEASRTDYLK
ILVDLGFLPTFADYNVTGHLNANANSVRVVKALICAGFYPNIVRVHHPEKTYVQTEGGAV
VKTAAAHELRFFTKEDGRVFLHPASVNFPVGIFESPYLVFTEKVKTSKIFLRESTMIPAY
ALLLFGGEIRVKHERQSITVDDWLQFEAPARIAVLIRELRLKVDSILLDKIQQPSVDISS
TPVVTALIRLLTTDGF
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaccgggaagaagcccgcgcggcatgtgtacaagacgggtgccgccggatgc
gggggcaaagcggctccaacgtctgcaaagaacacgggccagccattgccatgcccgttt
tgtgacagaatatttaagcaggacgggcgattgaaagagcatctgaaaaacaaacatgct
gatgaagagaaccaggaatctgagttatctgtagatgttaacaatgtagagcaacaagct
agctcaagcgagcctgtccagaatccacagcgcgatgaacatggatacccaatcaagtct
cctaagacacttctccatgaatggtgccagaaaaacaagaagcctcaaccaaaatttaag
gctgtagaagtggaagggggcggtttccactgtcgtgttattctgcctgatgacaaaaaa
agtgaagctgatgttatcctgtggtataggagggaaccgacacgcacatctatggaagct
caacatcgtgcctctgttatggcactttatcatataatgggaaatcgcaggttggaccgt
attcttggtgaagattatagacagctctggtttgaccttgaaaaggctgccgaagagcgt
aaagaatacctcaaactgcatccaccgcagccaaggcagaaacccgctccagtgcaacga
gagctgcactctgtgttcatgagtgaaggtaatcggcgtcttgttgaagatatcattcga
ggctcaggtacaagcgataatgtcgcatctacccctagcgttgaacaagacttaaatgtg
gatggtggagtttttaaagatctcgatgaagatgctgccagtacctgggaggacataaca
gaacctgaaaccagtggtcggaaggttgatcatcctcagaagtatgctcatacaaagggt
gctgcgcctaagttacatttcaaagaaaaaaatctatcgcggaaatcatcagaaagaaaa
gcaatggaacagagatccgtggatgttcctccaaaggaacgtctaagatcacagcttcaa
cgttatggatttaagcctcaccatgtaaatgctgctcttactgaacgtgacgagctttca
agtgctctcgactggctggttttacatgttccggagaatgagttgcccccaaagtttgca
gcagaatcttctatgatgtctgtccaagttcttgtgagagggaaacaagtgccggacaag
gcacagggtacttttgctaacatgtcaagccaaagtgtagcccatttacaagaatatggg
tactctgatgttgactgcattgaagccttagtagttgccaagggtgatgaatcgatagcc
ttgggcagtctatttaggacgcttatagggagtcagagtgacaattcaagggaaattgga
gacgatggcactccagaatctattgcagagatgagagaagaagagcttatagtgttgcag
tccatttttgaggaggagaatatttccttgtcagaaaatgtaattacgttcaacttatct
ctggaagagactgttgatgcaacccttcacatggaggttcgaataccaccagaatcccgc
tatccatacgaaactccaattttagcatttcgaagtagcgacttgccaagcgctttcttg
ctggagctcacgaaaaaagtgggaaaagttgcctcgcagatgagtagacccatgttatat
gatcttttttccactgccgctgaactcacagtatctttacttcccgaatatctgagtcat
ggagatcacacctccatattgactggtgaccccgattgggatcagttgtctgaatcggag
cctgatcttggatctaaacttttcctgaaggtagacgaaagtataactggaaattctaag
ggtaattccatcaatgcaagtatggacaatccagataatcaatccagaacgtatgtacct
cctggactacggaagcctcagaataatcaaggtgatttgttgagctcccaacaagcagat
gacatatgtacgaatgctggaaagaatagtcgagccaggggtagaacaggaaggaaagtt
ttaagagaccatgacgaggagcaagagttaggtggcgaagagtacaaggtagatgctgct
gatgttcgagtagagagtgataaattgaaggaagagtgggagttatggcagaagtcacgt
aaagatcaagagctccgtggcgttagagcgaggttgccggcgcacaaatatcgtggtgat
cttttagatgcaataaatggctcgttcgtgaccattgtctgtggtcaaacaggatgcggc
aagagtacccaggttcctcaattcgtgttggaggattatattgagaaaaacaagggagga
gaatgcaatattatatgcacacaacccagaaggatttcagccatcggtttggcagatcga
gtatcgaaagaaaggggccaggcagttggcgttacagtgggttactcagttcgacttgat
tcttgtcgatcaaagcgaaccaggcttcttttttgcacaactggaatccttctgcgacgg
ttgctatctgatcccaacttgaccggtgtaactcatgtgatagttgacgaggtgcatgaa
cgctctttggagagtgatcttttgctgctcttccttcggcagtttctgaacagaccacag
aacactcttcgcatgattctgatgtctgcaacagtagacgctggtgtatttgccaactac
ttcaagaaatctggaagttatgcaccccctgtcgtaaatattcctggctttacgttccca
gtgcgagagctgtacttagaagatgcgctggaaatgactggctaccgtgttgggcgaaat
tcacgttatgccttgcgtaagaaattagcacagggagaagtttctactaccgctgctttg
aaaccccagattcggggggctgctgttttggctggagatctagaaagctgggaagatgtg
ctggacgagaaagaagcatcagattgcataggtattgaatcttatagtgagagtactcag
caatctttgaagatagtagatcaaagtataatcaatttcgagctgatcgaaactttgata
tgctctattctcgaacaagaggcaaatccttccacaatgtatgggagattaacatcttta
gaagaagagacagagagtcgacacgctagatccttgacctcaaccagtggacagaaagag
aatgtgggtgctatacttgtttttcttcctggcatgctggaaattcgtaagcttcaacaa
cgtctacagtcatctcatcagatttcggcactggggctcggtggactgtgggtgttggct
ttgcacggttctttgtctggagaggagcagaagcgtgtgttcaagaagcctccttcaggg
attcgaaaagttgttttggccacgaatattgctgaaaccagtattaccattgatgatgtt
gtgtatgtgattgatactgggcggcacaaggaaatgaggtatgatcataacagagggctt
tcttgtttggaagatacatggatttcaaaagctaatgcaaagcagagacgtggacgtgcg
ggaagggttcgccctggatgttgccttcgtctgttcagccgacaacagtttgagaacttt
gaggaacagcaacttccagaaatgctccgtgtttctcttgaaggcttatgtttgagggtg
aagaccttaatggaaggaaaagtaatggaagtagtttcccaaatgttgacacctccatct
tttgaagcagttcgcacatccttgaagagcttagaagatttgagtgctcttgacaaggca
gagaggctgacacctctgggccaacacttggcccgtatgcctgtggatgcaagggttggc
aagatgttgatatttggttgtatgttaaagtgtctcgatccaattctcacgatagctgca
tctttgagtggtcgatctccgtttatgtcacccatggagagacgcgaagaagctgcagct
gcaaggatgaaacttgcagggaatagcaagagtgatcacatggcaatagcggctgcttac
aatgggtggacaagtgcaaagaatgatggctggggttcagagaatgaatattgccaagct
aacttcttatcaagagagacattatctggaatcgaagctagtcgaactgattacctcaaa
atattggtagatcttggattcctaccaacttttgctgactataatgttacaggtcatctt
aatgcaaacgctaacagtgtccgggtggtgaaggctttgatctgtgcgggcttttatcca
aatattgtgcgggtacatcacccagaaaaaacttatgtgcaaactgaagggggtgctgta
gtgaaaactgctgctgctcacgagctccgtttcttcaccaaagaggatggccgtgtgttt
ctacatcctgccagcgtcaacttccctgtgggaattttcgagagcccctatcttgtgttc
accgagaaagtgaagacgtccaaaatttttctgagagaaagcacaatgatacccgcctac
gctctattactatttggcggtgaaataagggtgaagcatgagcggcaatcaattactgtt
gacgattggctgcaatttgaagctccagcccgtattgcagttcttattcgtgaattgcgg
ttgaaagttgattcaatactcttagataaaatacagcagccctctgtagatatctcatcc
actcctgttgtgacggccctcattcgattacttacaactgatggattctaa
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