Physcomitrium patens (spreading earthmoss): 112288735
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Entry
112288735 CDS
T01041
Name
(RefSeq) eukaryotic initiation factor 4A-15 isoform X1
KO
K03257
translation initiation factor 4A
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112288735
03012 Translation factors [BR:
ppp03012
]
112288735
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112288735
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112288735
mRNA cycle factors
Stress granule specific factors
112288735
Translation factors [BR:
ppp03012
]
Eukaryotic type
Initiation factors
eIF-4
112288735
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112288735
Exosomal proteins of bladder cancer cells
112288735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Flavi_DEAD
Ubiquitin_TPR1
Motif
Other DBs
NCBI-GeneID:
112288735
NCBI-ProteinID:
XP_024389020
UniProt:
A0A7I4AEC5
LinkDB
All DBs
Position
11:15121310..15124560
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AA seq
475 aa
AA seq
DB search
MSVIQDRIFARVESASTIRFAGFSNVKKSADCLYSSAHENHVRAQTRSRAVGHNSPSFSS
SSMAGSAPEGSQFDARQYDAKMENILSAEGEDFISTWEEVHDTFDVMGLHENLLRGIYAY
GFEKPSAIQQRGIVPFTKGLDVIQQAQSGTGKTATFCSGILQQLDYQLLECQALVLAPTR
ELAQQIEKVMRALGDYLQVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVYDMLRRNAL
RADSIKCFVLDEADEMLSRGFKDQIYDIFQLLPQKLQVGVFSATMPPEALEITRKFMNKP
VKILVKRDELTLEGIKQFYVNVDREEWKLDTLCDLYETLAITQSVIFINTRRKVDWLTDK
MRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT
QPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLQDIQKFYNTVIEELPSNVADLL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgatacaggatcggatttttgcgagagtagagtctgcctccactatcagattc
gcaggtttttcgaatgtaaagaagagtgctgattgtttatattcttccgctcatgaaaac
catgtccgtgctcaaacacgcagtcgtgctgttgggcacaattcaccgagtttttcttcc
agtagtatggcaggttctgctcccgaaggttcccagttcgatgcacgccaatatgacgcc
aagatggagaacatcttgtcggccgagggcgaggacttcatttcgacgtgggaggaggtt
cacgacacttttgatgtgatgggtctacatgagaaccttctgagaggaatttacgcctat
ggttttgagaagccatctgctatccaacagcgtggaatcgttcccttcaccaagggtctt
gatgtcattcaacaagcccagtctggaactggcaagacagctactttttgctctggtatt
ctccaacaattggattatcagcttcttgagtgccaagctctggttttggcacccactcgg
gaacttgcccagcagattgagaaggttatgcgcgcgttaggtgactatctccaggttaag
gtacatgcctgtgtcggaggtaccagtgtcagggaggatcagcgaattttgcaagctggt
gttcacgttgttgttggaactcctggccgtgtgtacgacatgttgcgaagaaacgcactc
cgtgctgattcaatcaagtgcttcgtgctggacgaggccgatgagatgctttcgagggga
ttcaaggatcagatttatgacatcttccagcttcttccacagaagcttcaagtgggtgtg
ttttctgccacaatgccacccgaagcgcttgagatcaccaggaagttcatgaacaagcca
gtgaagatcttggtcaagagagacgaactgactctggagggtatcaagcagttttacgtg
aatgtagacagggaggagtggaaattagacacactatgtgatctttatgaaaccctggcc
attacgcagagtgttattttcattaacacccgccgaaaggtcgactggcttaccgataag
atgcgagctcgcgaccacaccgtctctgcaacacacggagatatggaccaaaacacccgt
gacatcatcatgcgtgagttccgttcagggtcatcccgagtgctcattaccaccgatctc
ctggctcgtggtatcgacgttcaacaggtttctctggtcatcaattacgatctgcctacc
cagcctgagaactatctccaccgtattggacgaagtgggcgttttggacgtaagggtgta
gctatcaacttcgtcacaagggatgacgatcgcatgcttcaggatattcaaaagttctac
aacaccgtgatcgaggagttgccttccaatgttgcagatcttttatga
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