Physcomitrium patens (spreading earthmoss): 112288793
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Entry
112288793 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X2
KO
K13091
RNA-binding protein 23/39
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112288793
Spliceosome [BR:
ppp03041
]
Common components
Common spliceosomal components
General mRNP proteins
112288793
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
112288793
NCBI-ProteinID:
XP_024389128
UniProt:
A0A2K1JWF2
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All DBs
Position
11:complement(17363713..17369820)
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AA seq
642 aa
AA seq
DB search
MEFDEYDYLEKMTEGGDVKVNNHEGGNGHDRDGRDRRKSSYKRRSGDNDTHDHQSKRTRA
EDEERERGDRVDKDREKERGVEKSERDRSRSARDGGHGSPGRTRERGSEKENEKERSSRS
SRSDKGRDKSDRGDGERAEKESRREGRESSVKKSSDKGRSREKEREREKDRERDRSRDRH
RSREKDREREREKEREKEREREKEKEKEREREKEREREHRKRSRELKDRKEEIVANEPEA
DPERDQRTVFAYQISLKADERDVYDFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMS
VPMAIALSGQLLLNQPVMVKPSEAEKNLVQSTTAVPGVTGGFIGPYSGGARRLYVGNLHF
NMTEDQLRQVFEPFGPVELVQLPSDIETGQSKGYGFVQYARLEDARAAQQNLNGLELAGR
PIKVSAVSDQIGMEDMGVHPGELDDDEGGGLSLNARSRALLMQKLDRSGSGTSNTGATLP
AAPVPALGLLGTAVPTGVTPLVRPPFFVQNPLVLAGAATGLGAAALGTPGLVMPPVVGAV
DAIGQPSEYLLLKNMFDPSTESDPEFDLDIKEDVQDECSKFGAVKHIFVDKNSAGHVYLC
FESTPAAMAAQRALHGRWFAGKMITATYMSALAYQTKFPDCR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgatgagtacgactacctggagaagatgacggagggcggggatgtcaaggtg
aacaaccatgaggggggcaatgggcacgatcgagacggtagggatcgacgaaagtctagt
tataagcgtcgcagtggcgataacgatacgcacgaccaccagagcaagcgtactcgcgca
gaggatgaggagcgtgagcgcggcgaccgagtggacaaggaccgggagaaagagagaggc
gtggagaagtcggagcgcgatcggtcgaggagtgcacgggacggcggtcacggctcgcct
ggtcggacgcgggaacgagggtctgagaaagagaatgagaaggaacggagtagcaggagc
agcaggtcggacaagggaagagacaaaagcgacagaggtgatggtgagcgcgcggagaag
gagtccaggcgtgaaggcagagagtcgagtgtcaagaagtcttctgataaggggaggtca
cgcgagaaggagcgggaaagagagaaggacagggagagagacaggtctcgtgaccggcat
cgcagcagggaaaaggaccgcgagagggagcgtgagaaggagcgagaaaaggagcgggag
agggagaaggaaaaggagaaggagagggaacgagagaaggagcgcgaaagagagcaccgg
aaacggtctagggagctcaaggatcgcaaggaagagattgtggcgaatgaacctgaggct
gaccctgagcgggatcaaagaacagtttttgcatatcagatttcattgaaagcggatgag
cgggatgtgtacgattttttctctcgggctggaaaggtgcgggatgtccggcttatcatg
gaccggaattcgaggcgctccaaaggagttgggtatattgagttctatgatgccatgtca
gtgccaatggctattgctttgtcaggtcaattattattgaatcagccggtcatggtaaaa
ccctctgaagctgaaaagaatctcgtacaatctacaactgcggttccaggagttactggt
ggcttcatcggtccttactcaggaggcgctcgtcgtctttatgtcggaaatcttcacttc
aatatgactgaggatcagcttcgtcaggttttcgagccttttgggccagttgaactcgtg
cagctaccctctgatattgaaaccggacagagtaaaggatatggatttgtgcaatatgca
aggttggaagacgctcgtgcagcgcaacagaatctcaatggactggagcttgcaggacgt
ccaattaaggtatcagccgtctcagaccagattggcatggaagacatgggggttcatcct
ggcgaacttgatgatgatgaaggaggtggtctgtcgttgaatgctcgttcgagagccctt
ctcatgcagaagctggatcggagcggaagtggaacaagcaatactggtgctaccttgcct
gccgccccagtgccagcacttggtcttcttggaacagctgtgcctactggtgtaactcct
ttggtgagaccccctttcttcgttcagaaccctctggtcctagcaggagccgctactgga
ttgggggctgctgcccttggtacacctggcctcgtgatgcctccggtagttggtgcagtt
gacgcaattggacagccaagtgaatatctgctgctcaagaacatgtttgacccgagtact
gagtctgatccggagttcgacttggatattaaggaggatgtacaagacgagtgctcaaag
ttcggtgctgtcaaacatatctttgttgataagaatagtgcaggtcatgtttacctgtgc
tttgaatcaacacccgcggccatggcagctcaacgggctttgcatgggcgttggtttgcg
ggtaaaatgattactgcaacgtacatgagtgcgctcgcataccaaacgaagtttccagat
tgcagatag
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