Physcomitrium patens (spreading earthmoss): 112288803
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Entry
112288803 CDS
T01041
Name
(RefSeq) DNA repair protein RAD51 homolog B
KO
K04482
DNA repair protein RAD51
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03440
Homologous recombination
ppp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112288803
03460 Fanconi anemia pathway
112288803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112288803
04121 Ubiquitin system [BR:
ppp04121
]
112288803
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112288803
Membrane trafficking [BR:
ppp04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112288803
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
112288803
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
112288803
RecA family proteins
112288803
FA (Fanconi anemia) pathway
Other FA pathway factors
112288803
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad51
RecA_N
AAA_25
HHH_5
ATPase
Motif
Other DBs
NCBI-GeneID:
112288803
NCBI-ProteinID:
XP_024389152
UniProt:
A0A2K1JVP6
LinkDB
All DBs
Position
11:14603263..14604979
Genome browser
AA seq
342 aa
AA seq
DB search
MATVSAATEGVTTSAATEEEVHHGPYLVEQLQNCGISSLDLKKLKDAGFCTVESVAYSAK
KDLVLIKGLSDAKVDKIIEAATKLVPMGFTSAKQMHEQRAELIQITTGAKEFDNILEGGI
ETGSITEIYGEFRSGKSQICHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIAEK
YGLNGQDVLDNVAYARAYNTDHQMKLLVEAASMMAETRFALMVVDSSTALYRTDYSGRGE
LAARQVHLAKFLRGCQKIADEFGIAVVITNQVVAQVDGSAMFNGPQHKPIGGNIIAHAST
TRLSVRKGRGEERVIKVVASPCLAEQEARFQITNEGVVDVKE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggccactgttagtgcagccacggaaggtgtcaccactagcgccgctactgaggaggaa
gttcatcatggtccgtatcttgtcgagcaacttcagaattgtggtatcagtagtctcgat
ttgaagaagctgaaggatgcggggttttgcaccgtcgagtctgttgcatattccgcgaag
aaagatcttgtgcttattaaggggctcagtgatgcgaaggtggataaaatcattgaggca
gctacgaagctcgttcctatgggcttcactagtgccaagcagatgcacgagcagcgggcg
gagctcattcaaattaccacaggtgcaaaggagtttgacaacattctcgagggcggaatt
gagactggttccattacagaaatttatggagagtttcgttcgggtaagagccagatctgt
cacacgctctgcgtcacttgtcagctgccattagaccagggtggaggtgaggggaaggct
ttgtacattgacgcagagggcactttcaggcctcaacgattgcttcaaattgcagagaag
tatggcttgaatggacaggatgtgctcgacaacgtggcatatgctcgagcttacaacact
gatcatcagatgaagctgctagtggaagctgcgtctatgatggctgagactaggtttgcc
ctgatggtggtggacagttcgacagcgttgtataggacggattactcagggagaggggag
cttgcagcccgacaagtccaccttgccaaattccttcggggctgtcagaagatagcagat
gagttcggcatagcagttgtaataacaaatcaagtggtagctcaagttgacgggtcggct
atgtttaatggtccccagcataaacccattggcggtaacatcattgcgcacgcatctacg
acaaggttgtccgtgcggaaaggtcgtggtgaggagcgtgtaattaaggtggttgcgtct
ccatgcttagcagagcaggaggctcgctttcagattacaaatgagggcgtcgttgacgtc
aaagagtaa
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