Physcomitrium patens (spreading earthmoss): 112288974
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Entry
112288974 CDS
T01041
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112288974
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppp01002
]
112288974
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112288974
03029 Mitochondrial biogenesis [BR:
ppp03029
]
112288974
Peptidases and inhibitors [BR:
ppp01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
112288974
Membrane trafficking [BR:
ppp04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
112288974
Mitochondrial biogenesis [BR:
ppp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112288974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
112288974
NCBI-ProteinID:
XP_024389555
UniProt:
A0A2K1JVU0
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All DBs
Position
11:complement(15043449..15048180)
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AA seq
386 aa
AA seq
DB search
MRRLQELLLGPRFTAANASSGSEIWVLGLCYKVSADPNNETLSVQAFEEFISDFTSRIWI
TYRKGFECVGQSKLTSDVGWGCMLRSGQMLLAQALVCHYLGRSWRREPGQPCSQAYLQIL
QTFGDSESCPFSIHNLLEAGHPFGLAAGSWLGPYALCRTLEALARADREQSQKKGGKRAL
PFAVYVVSGEAEGERGGAPVLCVEDVATLCSKWREPTEEWTPLLVLVPLVLGLDKVNPRY
LPSLRATFTFPQSLGIAGGKPGASTYLIGVQDEQAMYLDPHENQQVVPVTPENLELDTSS
YHCSTVRRLPLDTIDPSLAIGFYCRDRAEFDDLCARSSELAKQSNGAPMFTVAEKSAPPK
PADSCNLDLEESIPKDPSSEDDWQML
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgtctgcaggagctgctgctggggcccaggttcacagcagcgaacgcatcgtca
ggaagtgagatttgggttttgggactatgttataaggtgtctgcagaccctaacaatgaa
actctttcggttcaagccttcgaagagtttatcagcgatttcacttctcgcatctggatc
acctatcgaaaaggttttgaatgtgtgggccagtcaaagttgactagcgatgtgggatgg
ggatgcatgttacgcagtggtcaaatgcttctagctcaggcacttgtttgccactatttg
ggcaggtcatggcgacgggagcctggccagccatgttcgcaagcatatctgcaaattctg
caaaccttcggtgactctgagtcgtgccccttctcgatacataatttgctggaggcaggt
catccttttggtctggctgctggatcttggcttgggccttacgctctttgtaggacacta
gaagcgcttgcaagggcagacagggagcagagtcaaaagaagggtggcaagcgagctttg
cctttcgctgtatatgtagtttctggagaagcagagggtgagagaggtggtgcaccagtt
ctatgtgtagaagatgttgcgacattgtgctccaagtggagagagccaactgaagaatgg
actcccctgttggtgctcgtgcctcttgtccttggccttgacaaggtgaaccctaggtat
ttgccgtcattgagggcaacatttaccttccctcaaagccttggaattgcaggtggtaag
ccaggagcttcaacttacttaataggcgtccaagatgaacaggcgatgtacttggacccc
catgagaatcagcaggttgtgccagtaacaccagagaatttggagctggatactagctcc
tatcattgcagtactgtgcggcgtctcccattggatacgattgatccgtctcttgctatt
ggtttctattgtagggatcgagccgagttcgatgacctgtgcgcacgttcatcagagttg
gccaagcaatccaatggcgcacccatgtttactgttgctgagaagtctgctcctccaaag
ccagcagacagctgcaacttggatctggaagaatcgatccccaaagacccttcatccgaa
gatgattggcaaatgctttga
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