Physcomitrium patens (spreading earthmoss): 112289036
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Entry
112289036 CDS
T01041
Name
(RefSeq) serine/arginine-rich splicing factor SR45a isoform X1
KO
K12897
transformer-2 protein
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112289036
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppp01009
]
112289036
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112289036
Protein phosphatases and associated proteins [BR:
ppp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112289036
Spliceosome [BR:
ppp03041
]
Common components
Common spliceosomal components
SR proteins
112289036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
112289036
NCBI-ProteinID:
XP_024389721
UniProt:
A0A7I4BVT5
LinkDB
All DBs
Position
1:complement(19780722..19784558)
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AA seq
217 aa
AA seq
DB search
MDSPRGRSRTPPYRYSDSPSPRRSSRGRSRSRTPPSRRNRDRSDVREDATNPGNNLYVTG
LSTRVTEKDLDEHFSREGKVVECRLVVDPRTRESRGFGFVTMDNADDADRCVKYLNRSTL
EGRIITVEKAKRKRARTPTPGEYLGVRAAVQAHSRGYGGDYGGRNGGRDSYSDRRAPRYS
PYRGRDGRDRERSPRHSPYRGYRRERSRSPRYSPYRR
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggactctcctagaggacgcagcagaactccaccttatcgttattcggactctccatct
ccaagacgctcgtctcgtggccgttcacggtccagaactccaccttcaaggaggaacagg
gacaggtcggatgtaagggaggatgccactaatccaggaaacaatttatacgttactggt
ctttctactcgagtaacagaaaaagatttggatgaacatttctctcgtgagggaaaggtg
gttgaatgccgccttgtggttgatcctcgtactcgggaatctaggggtttcggcttcgta
accatggacaacgcagacgatgctgatcgctgtgtgaagtacctcaatcgctcgacactt
gaggggcgtatcataacggttgagaaggcaaagaggaaacgagctaggactccaactcct
ggggaatatcttggtgtacgagctgccgtgcaagctcactcgcgtggttacggaggagac
tatggaggacgaaatggaggcagagatagctacagtgatcgtcgtgctccacggtactca
ccttaccgaggtagagatggtcgggacagagaacgctctcctcgacattctccataccgc
ggatatcgtcgtgaacgctcccggtcaccgcgctactcaccataccgtcgttga
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