KEGG   Physcomitrium patens (spreading earthmoss): 112289069
Entry
112289069         CDS       T01041                                 
Name
(RefSeq) uncharacterized protein
  KO
K12828  splicing factor 3B subunit 1
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112289069
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ppp03041]
    112289069
   03036 Chromosome and associated proteins [BR:ppp03036]
    112289069
Spliceosome [BR:ppp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    112289069
 Complex B
    112289069
 Complex C
   U2 SnRNP specific factors
    112289069
Chromosome and associated proteins [BR:ppp03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    112289069
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_ECM29 Htt_N-HEAT_1 HEAT_EF3_N Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N
Other DBs
NCBI-GeneID: 112289069
NCBI-ProteinID: XP_024389789
UniProt: A9RIM7
LinkDB
Position
11:complement(9588724..9593480)
AA seq 1292 aa
METDTVKEIARVQEERRKHEAELAKMTSLSFDKDLYGESNRFEGYERSIALNDDDDEPQD
ATEREVAKKLASYTAPKNLINDIPRGEVVDDGIGFKKPSRIIDREDDYRRQRLNRIISPE
RHDAFAMGDATPDERVRTYADIMKEERTRREKEETLKLIAKKKEEDAERRAHEESLAPTK
AQQAATKSVQAPAAAAAPAAPTTGSKRRNRWDQNQEQEEPKKAKTSSDWDGPEAAVGPSR
WDATPTPGRANLDATPMAASRRNRWDETPTPGRASDADATPGAGATPGATPAGMTWDATP
KLAGMATPGKKQRSRWDETPASMGSVTPLPGATPSMFTPGVTPIGGIELATPTPGQIALR
GPMTPEQVNMLRWEKDIEERNRPLSDEELESMFPMEGYKILEPPASYMPIRTPARKLLAT
PTPLGGTPLYQIPEEDRTQQYDVPKEAAGGLPFLKPEDYQYFGALLSEKEEEEMTAEESK
ERKIMKLLLKVKNGTPPQRKTSLRQLTDKAREFGAGPLFNQILPLLMSPTLEDQERHLLV
KVIDRVLYKLDELVRPFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAM
RPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAI
LMGCAVLPHLKSLVEIIEHGLNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWK
GIRSHRGKVLAAFLKAIGFIIPLMDAMYANYYTKEVMIILIREFQSPDEEMKKIVLKVVK
QCVSTEGVEASYIRQEILPEFFRNFWVRRMALDRRNYRQLVDTTVEIATKVGVADIVGRV
VEDLKDESEPYRRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLN
GFGTVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMG
HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ
ENCIDLVGRIADRGAEFVPAREWMRICFELLDMLKAHKKGIRRATVNTFGYIAKAIGPQD
VLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLS
FLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALIHLL
NYLWPNIFETSPHVINAVMEAIEGMRVALGPTILLNYCLQGLFHPARKVREVYWKIYNSL
YIGAQDGLVAAYPVLEDEGENIYSRPELKMFL
NT seq 3879 nt   +upstreamnt  +downstreamnt
atggagacggatacggtgaaagagattgcaagggtgcaggaggagcggcggaagcatgaa
gcggagttggcaaagatgacgtcgttgagtttcgacaaggatttgtatggggagtcgaac
aggttcgaaggttatgagcgctcaattgctctgaatgacgatgacgacgagccgcaggat
gcaactgagagggaagtggcgaaaaagcttgcttcctacactgcgccgaagaatttgatt
aacgacattcctcgaggtgaagtagttgacgatggtattggatttaagaagccgtcgcgg
attattgatagggaggatgactatcgtaggcagcgtctgaatcgtattatttctcctgag
cgacatgatgcatttgctatgggtgatgccactccggacgagcgggttcggacttacgcg
gatattatgaaagaggagcggaccaggcgagagaaggaggagacattgaagttgattgct
aagaagaaggaggaagatgcagaaagaagggctcatgaagaatcattggcgccaaccaaa
gctcagcaagcagctactaaatctgtacaggcccctgccgccgctgcggcgccagccgca
ccgactaccggaagtaagagaagaaacaggtgggatcaaaatcaagaacaggaggagcca
aagaaggccaagacatcttcagattgggatggacccgaggcggcggttggccctagccgt
tgggacgctacacccactccaggacgcgcaaatctggatgctacacccatggcggcttct
aggcgtaatcgatgggacgaaacgcccacaccaggacgagcatcggatgcagatgcaacg
ccgggcgcaggtgcgactccaggcgctacgccggcaggcatgacatgggatgcaactccg
aaactcgcaggaatggccactcctgggaagaagcagcgatctcgatgggacgaaacgcct
gcatccatggggagtgttactcctttaccaggggccactccatccatgttcactcctgga
gtcactcctattggaggcatcgagcttgccactccaacgccaggtcaaattgcactccgg
gggcccatgacgcctgaacaagtcaatatgttacgatgggagaaagacatcgaggagagg
aataggccattgtcagatgaggaattggagtccatgtttcccatggagggttacaagatt
ttagagccccccgcttcttacatgcccatcagaacccctgcccggaagcttttggctacg
ccgacccctttgggtggcacaccgctgtatcaaattcccgaggaggatcgcactcagcaa
tacgatgtcccgaaggaggcagctggaggactacctttcctgaaacctgaggactatcag
tacttcggagccttgttaagtgagaaagaagaagaggaaatgaccgcagaagagagtaag
gagcgtaaaattatgaagctcttgctgaaggtgaagaacggcactcctcctcaaaggaaa
acgtcgttgcggcagctgactgataaagcgagagaattcggagctggacctttgtttaac
cagatcttgcctttgctcatgtctcctacgcttgaggatcaggagaggcatctgctcgtg
aaggttattgacagggtgttatacaaattggatgaattggtcaggcctttcgttcacaag
atccttgtggtcattgagccccttcttattgatgaggactactatgcccgtgtggaaggc
cgggaaatcatttccaatctgagcaaagctgcaggattggccactatgatcgcagcaatg
aggcctgatattgataatatcgacgagtacgtgagaaacaccaccgctagggctttcagt
gtggtggcgtctgcactgggaattcctgcgttgttgccgtttcttaaagccgtctgtcag
agcaagaagtcttggcaggctcgacacacgggtatcaaaattgtgcagcagattgccatt
cttatgggatgtgcagtgcttcctcatttgaaatcacttgtggaaatcattgaacatggt
ttgaacgatgaaaaccaaaaggtcagaactattactgctttgtctctagccgcgcttgct
gaagcagcagctccttacggtattgagagcttcgattctgttttgaagccgctttggaaa
ggtattcggtcgcacaggggcaaagtattggctgcatttttgaaagcaattggatttatc
attcctcttatggacgcaatgtatgctaactactacaccaaagaagtgatgatcatcctc
atcagggagttccagtctcccgatgaagaaatgaaaaagattgtactgaaggtcgtcaaa
caatgtgtaagcacagagggagtggaagcaagttatatcaggcaagagattcttcctgag
tttttccgtaacttttgggttcgaagaatggctcttgatcgcaggaactatcggcagctg
gttgatactaccgttgagatcgcaaccaaagtgggcgttgcggatatcgttggaagagtt
gttgaggatttgaaggatgagagcgaaccttatcgtcgaatggtgatggaaaccatcgag
aaagtggttgctaaccttggggcttcagatatcgatgctcgacttgaggaactgttaatt
gatggcattttgtatgcctttcaggagcagacaagcgatgatgcaaatgtgatgcttaat
ggctttgggacagtagttaatgctttaggacaaagagtcaagccctatttgccacagatt
tgtggtaccatcaagtggaggctcaacaataaaagcgctaaagtgcggcaacaagcagcc
gatcttatttctcgcattgcagttgtgatgaagcaatgtcatgaagaacaattgatgggg
catcttggagtagtcttgtacgagtatttgggtgaagaatatccggaagttcttggttct
attctgggggcgttgaaggctatagtgaacgttatcggtatgacaaagatgactcctcca
atcaaggatttattgcctcgactaactccaattcttaaaaacaggcatgaaaaggtacaa
gaaaattgcattgatttggttggtcggattgctgatagaggagcggagtttgttcctgca
cgtgaatggatgaggatctgttttgaactgctcgacatgctgaaggctcataagaaagga
attcggcgggcgactgtgaatacctttggatacattgccaaggcaattgggccccaggat
gtgttagccacattgctcaacaatcttaaggtgcaggaaaggcagaaccgtgtgtgtact
actgtggctattgccatagtggctgaaacttgctctcctttcactgtgcttccggcattg
atgaatgaatatcgggtcccagaattgaatgttcagaacggtgtgttgaaatcactctcc
tttttattcgaatacatcggagagatggggaaggactatatctacgctgtgactccactc
ttggaagatgcattaatggatcgagatctcgtccataggcagacagctgcttcagctgtg
aagcatatggctttgggggttgcaggacttgggtgtgaggatgctttgattcacttgctg
aactatttatggcccaatatcttcgagacatcgcctcacgttattaatgcagtaatggag
gctattgaaggcatgcgggtcgccttggggcccactattttgttgaattattgcttgcag
ggcctgtttcatcctgcgagaaaagtcagagaagtatactggaagatttacaactctctt
tatattggtgctcaagatggcttagtggctgcctaccccgttttggaagacgaaggagag
aacatctacagcagaccggagctgaaaatgtttctatga

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