Physcomitrium patens (spreading earthmoss): 112289137
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Entry
112289137 CDS
T01041
Name
(RefSeq) coatomer subunit beta'-1-like
KO
K17302
coatomer subunit beta'
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112289137
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112289137
Membrane trafficking [BR:
ppp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
112289137
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112289137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Coatomer_WDAD
WD40
ANAPC4_WD40
NBCH_WD40
Nup160
WD40_like
WDR54
TPR_2
Motif
Other DBs
NCBI-GeneID:
112289137
NCBI-ProteinID:
XP_024389865
LinkDB
All DBs
Position
11:complement(5621122..5630248)
Genome browser
AA seq
909 aa
AA seq
DB search
MPLRLEIKRKLAQRSDRVKCVDIHPTEPWILAALYTGSVCIWNHQNQTLVKSFEVTELPV
RSAKFIFRKQWIVTGADDMFIRVYNYNTMDKVKQFEAHSDYIRSVAVHPTLPYVLSSSDD
MLIKLWDWDKGWTCTQIFEGHSHYVMQVTINPKDNNTFASASLDRTIKIWNLGSPEPNFT
LEAHQKGVNCVEYFSGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHTHNVSAVAFHPD
LPIILTGSEDGYVRIWHSTTYRLENTLNYGLERVWTIGYIKGSNRVAIGYDEGTIMIKLG
REEPVASMDNSGKIIWAKQNEIQTVNIKAVPADFEITDGERLPLAVKELGSCDLYPQSLE
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSNDGEYAVRESTSKIKIFNKTLQ
ERKSIRPTFSAEAIYGGTLLAVRTNEFICFYDWVECRVVRRIDVVVKNVYWSDSGDLVTI
ASDNSFYILKYNRDVVTSYLDSGKPVDEQGVEDAFELLHEVSERVRTGIWVGDCFIYNNS
AWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNIMSYTLLLSLIEYKTLIL
REDYERAEEVLPTIPKEHMNSVARFLESRGMLEDALNVATDPDYKFDLAVQLGKLDMAKA
IAEESHSESKWKQLGELAMSAGKLDVAEECLNQAKDQSGLLLLYSAVGDAEGLERLAASA
RENGKNNVAFVSLFLLGKVEECIDLLIESNRIPEAAFMARTYAPSHVSRIVSLWRNDLKK
INQKAAESLADPEEYPNLFSDWESALATEAKMKDLRSKYIPAATYLNFINGVEEELTEDL
QGLDITGDEPAENGHGFEENEDLIEEDGQEQDAHQVVEETFEDAEQSADGKSELGEEAAN
GDHEPAADS
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgccgctccgcctggagatcaagcggaagcttgctcaaaggtccgatcgggtcaagtgc
gtagacatccatccaacagaaccatggattcttgcggctttatacacaggcagtgtctgc
atctggaatcatcaaaatcagacacttgtcaagtctttcgaagtgacagagttaccagtg
cgatctgcgaagtttatatttcggaagcagtggattgtgactggtgcggatgacatgttc
atccgagtctataattacaacacaatggacaaagtgaaacagtttgaggcccactccgac
tacatccgtagtgtcgcagttcatcctactttgccttatgttctgtcttcatctgatgat
atgctcattaagctttgggattgggacaagggatggacttgcacccaaatctttgagggg
cattcacattatgtcatgcaagtgaccatcaacccgaaggacaacaacactttcgcaagt
gcatctttagatcgcaccatcaagatctggaatctgggttcacccgaacccaacttcact
ctagaggctcatcagaaaggagtgaattgtgtcgaatactttagtggtggtgatcgacct
tatctcataactggttcagatgatcaaactgccaaggtttgggattatcagaccaagagc
tgcgttcaaacactggaaggacatactcacaacgtatctgcagtggcattccatcctgac
ctgccaattatccttacagggtctgaagatgggtatgtccgcatctggcattcgaccacc
tacaggttagagaatactcttaattatggactcgagcgagtgtggactatcggttatatt
aagggatctaacagggttgcgattgggtacgatgaaggtaccattatgatcaaacttgga
cgtgaggaacctgttgcaagcatggataacagtggaaagattatctgggccaagcagaat
gaaatacagactgtaaatattaaagcagtcccagcagattttgagatcaccgatggggag
cgactgcctttggcagtgaaagaactcggaagttgcgacctttaccctcagagcttggag
cataatcctaatggcagatttgtggtcgtatgcggtgatggagagtacattatttatact
gccctggcatggaggaacagatcttttggctctgctttggagtttgtttggtccaatgat
ggtgaatatgctgtgcgagagagtacttctaaaattaaaatattcaataagactttgcag
gagagaaaaagtattcggcctactttctccgctgaagccatctatggcggaactttgctt
gcagtgcgaacaaatgagttcatatgtttctatgattgggtggaatgcagagttgttcgg
agaattgacgttgttgtgaagaatgtctactggtccgatagtggagatctggttaccatt
gccagcgataactcgttttatatcctcaaatacaacagggacgttgtaacatcatatttg
gatagtggcaagcctgtggacgagcaaggtgttgaggatgcgtttgaattacttcatgaa
gtatcggagcgtgttcgtacgggtatttgggtgggcgactgtttcatatataacaactca
gcgtggcgcttgaactactgtgttggtggagaagttacgacaatgtttcacctggaccgt
ccgatgtacctgcttggctacttagcaaaccaaagtcgagtgtacctgattgacaaggaa
ttcaacatcatgagctacacgctgctgctgagtttgatcgagtacaagactctcatattg
cgagaggattatgaaagagcagaggaagtccttccaacaattcccaaggaacacatgaac
agtgttgcgcgctttttggaatcacgcggaatgcttgaggatgccctcaatgtcgcaaca
gatcctgattacaaattcgatcttgctgtgcagcttgggaagcttgatatggcaaaggct
attgctgaggaatcacatagtgagtccaagtggaagcaactgggagaattggcaatgtca
gctggaaagttggatgttgcagaggaatgcctgaatcaagccaaagatcaaagtggtttg
ctgcttctctattcggcagtgggcgatgctgagggactagaaaggcttgctgcgtctgcc
cgagagaatggaaagaacaatgttgcttttgtgtctttgttcttgcttggaaaggtggaa
gaatgcattgatctccttattgaaagcaaccgtatccctgaagctgcatttatggcacgc
acatatgcccctagtcacgtgtcgagaatagtttctctttggcgcaatgatttgaagaag
atcaaccaaaaggctgcagaatctttggcagatccagaagaataccccaacttgttttca
gactgggaatctgcgttagctactgaggccaagatgaaagatctgaggagtaagtacatc
cctgcagcaacttacttgaacttcatcaacggggttgaggaggagttaaccgaagacttg
caaggtttggacataactggagacgagcctgcagaaaacggccatggttttgaagagaac
gaggacttaatagaagaggacggacaagagcaagatgctcatcaagtcgtagaggagacg
tttgaagacgcagaacagagtgcggatggtaagagtgagcttggggaggaagcggctaac
ggagaccatgaaccagcagcagatagctag
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