Physcomitrium patens (spreading earthmoss): 112289246
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Entry
112289246 CDS
T01041
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1
KO
K14848
ribosome assembly protein RRB1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppp03009
]
112289246
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112289246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
CAF1C_H4-bd
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
112289246
NCBI-ProteinID:
XP_024390083
LinkDB
All DBs
Position
12:11174027..11177897
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AA seq
487 aa
AA seq
DB search
MARTKKKGKRGNKKPNKQASEYGAEVEMEDAEGNGASASAPPQPTKVWVPGVDEIGDDEE
LQFDPTAYHCLHSFKLGWPCLSFDIMRDDLGVLRRDFPHAMYCVAGTQADQPGSNSIAVV
HMTNVTGKIPKAPSAMEDGDDDADDSDSSSDEEDIEDLEGAPNQPIQSKKPIFKVRLVAH
QGCVNRVRAMTQQSHIVATWGDSGYVQVWDMGNHIRSMATSGPDPSGAPTTVRQAPLHIF
TGHKDEGYALDWSPITAGRLLSGDCKSNIHLWEPTPGGKWAVEKTPYTGHSASVEDLQWS
PTEADVFASCSVDGTLRIWDTRNRQGSAISIKAHDADINVISWNRVASCMIASGCDDGTF
RIWDLRNLKEDSFVAHFKYHTLPVTSIEWSPHDASTLGVTSADHQLTIWDLSLERDAEEE
ALYQAQLKQQQAEAPQDLPPQLLFVHQGQKDLKEFHWHPQIQGMLMSTAGDGFNILRPSN
LDNLPAL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtacgaagaagaagggaaagcgcggcaataagaagcccaacaagcaggcaagt
gagtatggcgcggaggtggagatggaggacgccgaggggaacggtgccagtgccagcgct
ccaccacaacccaccaaggtttgggtgccgggagtcgacgagattggagatgacgaagaa
ttgcaattcgacccgacggcttaccactgtttgcattctttcaagcttggatggccgtgt
ctcagctttgatataatgcgtgatgacttgggggtcctgcggagagattttcctcacgct
atgtattgtgtcgctggcacacaggccgatcaacccggcagcaattcgattgctgttgtg
cacatgacgaatgtaacaggaaaaatcccgaaagcgccgtctgcaatggaggatggagat
gatgatgctgatgatagtgacagcagtagtgatgaggaagatatcgaagatttagagggg
gctcctaatcagccaattcagtccaagaaaccaatttttaaggtgcgactagtggctcat
cagggttgtgtcaatagagttagggctatgactcaacaatctcatatcgttgccacgtgg
ggtgattcagggtatgttcaggtatgggacatgggaaatcatattcgatcaatggcaact
agtggacctgatccttctggcgcacccaccacagtacgtcaagctcctctacatattttt
actggccataaagatgagggctatgctcttgactggagtccaattactgcaggccgtctt
ctttctggggactgtaagagtaatatccatttgtgggagcctaccccgggagggaagtgg
gcggttgaaaagactccatacacgggtcactctgctagcgttgaggatctgcagtggagt
ccaacagaagcggatgtttttgcctcttgttcggtggacggaaccttaagaatctgggat
acacgtaatcgtcaagggtcagcaatctcgatcaaggctcatgatgcggatatcaatgtt
atatcttggaacagggtagcaagttgcatgattgcctcaggttgcgatgatggcaccttc
cggatatgggatttgagaaacctgaaggaggattcatttgtggcacatttcaagtaccac
acgcttcctgtaacatctatcgagtggagccctcacgatgcatccacgcttggtgttact
tcggctgatcaccaattgacaatttgggacctctcactagaaagagatgctgaagaagag
gctttatatcaagctcaactgaaacaacagcaagcagaggctcctcaagatttaccccct
caactgctattcgtacaccaggggcaaaaagatctcaaagagttccattggcaccctcaa
atacaagggatgttgatgtcaacagcaggagatggatttaatatcttgaggccatccaac
cttgacaatttaccagctctttaa
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