Physcomitrium patens (spreading earthmoss): 112289805
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Entry
112289805 CDS
T01041
Name
(RefSeq) ubiquitin domain-containing protein DSK2a isoform X1
KO
K04523
ubiquilin
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112289805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112289805
03051 Proteasome [BR:
ppp03051
]
112289805
Membrane trafficking [BR:
ppp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
112289805
Proteasome [BR:
ppp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112289805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
Dsc3_N
UBA_7
Rad60-SLD_2
Ubiquitin_2
Med31
Motif
Other DBs
NCBI-GeneID:
112289805
NCBI-ProteinID:
XP_024391182
UniProt:
A0A2K1JQM7
LinkDB
All DBs
Position
12:complement(9100508..9105150)
Genome browser
AA seq
549 aa
AA seq
DB search
MGGEPDGAVAGADSSQGGSSSDVVVVHVRSSNGNKFTVEVNLGATVLALKGLLVEKSEIP
ADHQRLIYKGRVLKDEQTLSSYGLQSDHTVHLVRGAPTSSTSAGADSPSPAPNPTSTPHP
ANPSGLGSMPGLGGMGFSGLGLGSDGGASPPFGMGPSEFQQVQQQLMQNPNLMREMMNAP
AVQNLMSNPELMRLLIMSNPQMREIIDRNPDLAHILNDPGTLRQTLDAARNPELMREMMR
NTDRAMSNIEASPEGFNMLRRMYETVQEPLLNAAAMGGEGANDMASNPFAAMMEMNGNAQ
RPAQAQGGAYSTGAATAVPNTAPLPNPWGPTPARAGQTPSAVPGTGGGIPDLGGLAGLGL
QDLGMMGGAGGLMDPGFMQQMLQNPQMQQMMQGILSNPQYMNQIMNMQPQLQTFLNQNPQ
FRDMMQNPDFIRQMSSPENLQQLMQLQQAMMGQHGRQTPGQNVGQNPAGLGGLAGMGGGM
NMDALLNMFGSLGSTAPSNPDAPPEQMYASQLSQLQEMGFFDTQENIRALSAVGGNIHAA
VERLLGNLG
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagagccggatggcgcagtagcaggtgcggattctagtcaaggagggagcagc
agcgacgtagtagtggtgcatgtgcgctcctcgaatggcaacaagtttacggtagaagtg
aatttgggtgccaccgtattggcgttgaagggcttgttggtggagaagtctgagattccg
gcggaccatcagcggttgatctacaagggtcgggtgctcaaggacgagcaaacgctcagt
agctatggtctgcaaagtgatcatacagttcatttagtcagaggagcaccaacatcatcc
acatctgctggtgccgacagccccagtccggcgcctaacccgacgtccacgccacatcca
gcaaatccttcaggtttagggtccatgccaggtttaggtggcatgggattttctggttta
ggattgggttcagatggtggagcttccccgccctttggaatgggaccctcagaatttcag
caggtgcagcagcagcttatgcaaaaccccaacctaatgagggagatgatgaatgcacct
gcggttcagaacctaatgagtaaccctgaactaatgcgattgctaataatgagtaatccc
caaatgagggagatcatcgacaggaatccagatttggctcatattctgaatgatcctggc
acacttcggcagactttagacgctgctcggaatcctgaacttatgcgagaaatgatgaga
aatacagatcgggccatgagtaacatcgaagcttcgcccgaaggatttaatatgctgagg
cgcatgtatgaaaccgttcaggagccgctcttgaatgctgcagccatgggcggagaaggt
gcaaatgacatggcatcgaatccgtttgcagccatgatggagatgaatgggaatgcacag
cgtccagcccaggctcaaggtggagcttatagcacgggtgctgcgacagcagtaccgaat
actgctcctctgccgaacccctggggtcctacaccagctagagcaggtcagacaccatcc
gctgtaccaggtacagggggaggtatcccagatttgggcggcctcgcgggacttggcctt
caagatcttgggatgatgggaggtgctggagggcttatggatcctggttttatgcagcag
atgcttcagaatcctcaaatgcagcagatgatgcaaggaattttgtccaatcctcaatat
atgaatcagataatgaacatgcagcctcagctacagacatttctgaaccagaatcctcaa
tttagggacatgatgcagaatcccgatttcattcgacaaatgagcagtcctgagaactta
cagcaactgatgcaacttcagcaagccatgatgggtcaacatggacgacaaactcctggc
caaaacgttggtcaaaatccagctgggttgggtggtttggctggaatgggcggtggaatg
aatatggatgcattactcaatatgtttggaagtcttggcagcaccgctccttccaaccct
gatgcgcctcctgaacagatgtacgcctcgcagctgtctcagttgcaagaaatgggattt
tttgatactcaggagaatattcgggcacttagtgctgtgggtggaaatattcatgctgct
gttgagcggcttctaggcaatctcggatag
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