Physcomitrium patens (spreading earthmoss): 112289837
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Entry
112289837 CDS
T01041
Name
(RefSeq) ubiquitin-ribosomal protein eS31 fusion protein
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03010
Ribosome
ppp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
112289837
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112289837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ppp03011
]
112289837
04121 Ubiquitin system [BR:
ppp04121
]
112289837
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112289837
Ribosome [BR:
ppp03011
]
Ribosomal proteins
Eukaryotes
Small subunit
112289837
Archaea
112289837
Ubiquitin system [BR:
ppp04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
112289837
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112289837
Exosomal proteins of colorectal cancer cells
112289837
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Plexin_RBD
Dsc3_N
IBR
UBL_UBAC1
DUF2604
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
112289837
NCBI-ProteinID:
XP_024391251
UniProt:
A9S8F4
LinkDB
All DBs
Position
12:3975762..3976665
Genome browser
AA seq
155 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKLKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
CPNPDCGAGTFMANHFDRHYCGKCGLTYVYQKAEA
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctgacgggcaagactatcacccttgaagtggagtcttct
gataccatcgacaatgtgaagtcaaaaattcaggacaaggagggaattccccccgaccag
cagcggctgatcttcgccggaaagcagctcgaggatggacgcactctggctgactacaat
atccagaaggagtcaaccctgcacctggtactccgcctgcgaggtggagcgaagaagagg
aagaaaaaaacctatacgaagccgaagaagctgaaacacaagaagaaaaaagtgaagctc
gctgtgttgcagttttacaaggtggatgactccgggaaggtgcagcggctgcgtaaggag
tgccctaaccctgactgcggggcgggtacgttcatggcgaaccacttcgaccgacactac
tgtgggaagtgtggtctgacctacgtgtaccagaaggccgaggcttga
DBGET
integrated database retrieval system
