Physcomitrium patens (spreading earthmoss): 112289842
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Entry
112289842 CDS
T01041
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112289842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112289842
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
112289842
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DHX37_C
CheY-binding
Motif
Other DBs
NCBI-GeneID:
112289842
NCBI-ProteinID:
XP_024391262
UniProt:
A0A2K1LB62
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All DBs
Position
1:complement(25377800..25381598)
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AA seq
955 aa
AA seq
DB search
MATMVGGAGGGEGSVRERTKGSDVLIHRVVTDIPGGPKRSKLASDTSCYDTPSAPVNCAV
NVSDVIVKDAQAALAILVNAPIGLIPEDRYPSPRVLKRSGDTLEDAVVLDDDDEEVQVTG
FIPRPLFVEKQTFSDKENGKFIKEGTLDEEDIFGHQRMLKEVDIPAVNLKEVQTEGVSYM
NINGDFLISSAKENLKKSTKKLKKGPKVIERLKGPKVVEGLKGPKVTEGLKGTEGEAKLP
SCKGGKGGGGNETNMEEDTFKERVFISPKSKKSRAQVLAEAVESGPDYEVEHDSDSDNDR
KATLGTEESSDDIWADIAVMKTQMRKDKDNVEEVRESCVHVYAIKSDVGRACTLCGLIKE
DIKDMTFMWRRPCSVRKIRLRGARLDRWDGCAGEVLEEEKKLVGMAQLEVHPFLENSMHP
HQLEGFKFLSRNLVEEDSGGCMLAFAPGTGKSFLTISFIQSFMIQVPNARPMIVAPKSML
RPWMQEFKKWEVEEMLVHNLYEADDQIEMLKRWQGTPSVLLVGYSQFVNPSSEVGRLLTE
GPGLMVMDEGHLARTEDTKILKALSRVFTRRRVLLSGTPFNNNFEEFYTTLELVRPNFMM
SANAQMCPTLNTFQLIVDNKIGPNHPVANGHLLKRPSNSGRKAFKDVIGENFESGKHGSI
ARALQQLRVLIKPFVAWHKGQILDSLPGITDLTVMLQLTAEQLELVEKNKKSEVRDSLQK
RAAAIYVHPILEPVANGCKRTQKDPRLKGDVDVKAGVKLKWVLDLVQLCDAAKEKVLIFS
EYLYSLALIENMTMQRMNWSRGSQILRLDGSLPPQEREMVQHKFNTDPEAKMLCASIKAC
GEGISLVGASRVVLLEVHWNPSVPRQAISRAFRIGQQRKVVVYRLIAADTYEATNMHAVA
TRKEWLSRLLFDPTIPCDDPNSILWDVTKDCSDLFLANLAGPLRENVSRIYQREF
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgatggtggggggagcaggaggtggagagggtagtgtgcgagagaggacgaaa
ggcagtgatgtgttgatccaccgggtggtgactgacattcctggggggccaaagcggagc
aagctggcgtcggacacaagctgctacgataccccatcggcgccagttaattgtgcggtc
aatgtttctgatgtgatcgtcaaggatgcacaggcggcactggcaattttggtgaatgct
cccattggtcttatccctgaggatcgttatccaagtcctcgtgttctgaagaggtctggg
gatactttagaagacgccgttgtacttgacgacgatgacgaggaggtgcaggttacgggc
ttcatcccaaggcccctctttgtggagaaacaaactttcagtgacaaagagaacggaaag
tttatcaaggagggcacccttgatgaggaagacatttttggtcatcagagaatgctcaag
gaagtggacattcctgcagtcaacctcaaagaggttcagacggagggggtcagctatatg
aacatcaatggcgattttctcatcagttctgcaaaagagaatttgaaaaagagtaccaaa
aagctgaaaaagggacccaaggtaatcgagcgtctcaaaggacccaaggtagtcgagggt
ctcaagggacccaaggtaaccgagggtctcaagggaacagagggtgaagcgaaattgcct
tcttgtaaagggggaaagggtggcggaggcaacgaaaccaatatggaggaggatactttt
aaggagcgggtgtttatttctcccaagagcaaaaagtcaagagctcaggtacttgcggag
gctgtcgagagcgggcctgattacgaagtggagcatgatagtgacagtgacaatgataga
aaggcgacccttgggactgaggaatcgtcggacgacatttgggcggacattgctgtaatg
aaaacccagatgagaaaggacaaggacaatgtggaggaagtgagagaatcttgtgtgcat
gtctacgcgatcaagagcgacgtgggcagggcttgcactctgtgtggattgataaaggaa
gacatcaaggacatgacgttcatgtggcgcagaccgtgttctgtgcggaagatccgtctc
agaggagctcggcttgacaggtgggatggatgtgctggcgaagtactggaagaagaaaaa
aagctggttgggatggctcagctggaagtgcacccatttttggagaactcgatgcaccca
catcaactggaaggtttcaagtttctgtccaggaaccttgtggaggaggactcaggtggc
tgcatgttggcattcgcacctggcacaggaaagtcttttctaactatcagcttcatacag
agcttcatgatccaggttccaaatgcgaggcccatgatcgtcgctcccaagagcatgctt
cggccatggatgcaagagttcaaaaagtgggaagttgaggagatgctggtgcacaacctg
tatgaagctgatgaccagatagagatgctgaagcgatggcagggaacccctagtgtgttg
ttagtaggatactcgcagttcgtcaacccaagcagtgaagtgggtagacttctaacggaa
ggtcctggtctgatggtaatggacgagggacaccttgcgaggacggaggataccaagatc
ctcaaggctttaagcagagtattcacaagacgcagggtgctcctatctggcactccattc
aacaacaatttcgaggaattctacacgacgctggaattggtgaggcccaatttcatgatg
agcgctaacgctcagatgtgtccaacattgaacaccttccaactgatagttgacaacaag
attggccccaatcatcctgtggcaaatggccatctcctcaagaggcccagcaactctgga
aggaaagcgttcaaggatgtgattggagagaatttcgagagtggcaagcacggtagtatt
gccagggctctgcagcagctaagggttctcatcaaaccctttgtagcttggcacaaaggt
caaatattagactctctgccaggtatcactgacctcacagttatgcttcaactaactgct
gagcagctggaactggtagagaaaaacaaaaagagcgaggtcagggacagtttgcagaaa
cgagcagcggcaatctacgtacatcccattctagagccagtagccaacggttgtaaacga
acacaaaaagatcctcgtttgaaaggggacgtggatgtgaaagcgggtgtgaagttgaag
tgggtgcttgacttagtgcaactgtgcgatgctgccaaagagaaggtgctcattttcagc
gagtatctgtactccctggcattaatcgaaaacatgaccatgcagaggatgaattggtct
agaggttcacagattcttaggctggatgggtcgttgcctccacaagaaagagaaatggtt
caacacaagttcaacactgatcctgaagcgaaaatgttgtgtgcatccatcaaggcatgt
ggagagggcatatcccttgtgggagcttcgagggtggtcttactagaggtgcattggaac
ccgtcagtcccacgtcaggctattagtagagcgttccgaatcggccagcagaggaaagtt
gtggtgtatcgactgatcgctgcagacacatatgaggcgacgaacatgcacgccgtcgcc
acgcggaaagagtggctgtcaaggttgctgttcgatccaaccattccttgtgatgatccc
aacagtattctgtgggatgtcacgaaggattgtagtgacttatttcttgctaacttggcg
gggccacttcgggagaatgttagcagaatttatcaacgagaattctaa
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