Physcomitrium patens (spreading earthmoss): 112289963
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Entry
112289963 CDS
T01041
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03420
Nucleotide excision repair
ppp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112289963
09124 Replication and repair
03420 Nucleotide excision repair
112289963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112289963
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112289963
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112289963
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
112289963
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
112289963
TCR (transcription coupled repair) factors
Cul4-CSA complex
112289963
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112289963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
112289963
NCBI-ProteinID:
XP_024391521
LinkDB
All DBs
Position
12:9710097..9718107
Genome browser
AA seq
820 aa
AA seq
DB search
MSQKKRLSSSSGGSGGISLNMISATKKPKNQQQTSIPDGFEKNGKLGMAVEVTNSDMMLM
NGVEDHLASAGPASAMTVSSSPGIGTTANLSRKKATPPQPARKLVIKPFKEKPKLPKDFE
EVTWAKLREAVTAIHLKQPVNCSLEELYRAVEDLCLHKMAGNLYRRLQQECESHISVKLR
DLVGRSPDSVVFLSHVESCWQDHCDQMLLIRSIALYLDRTYVIPNSGVRSLWDMGLQLFR
RHLSACPEVESKTVSGLLTLIEKERMGETVDRSLLKHLLRMFSALCIYSESFERRFLDCT
ADFYAAEGIRFMQQTDVPDYLKHVENRLHEENERCLLYLDGSTRKSLVATAEKQLLSRHT
TAILEKGFSMLMDANRLADLQRMYMLFARVNTLESLKMALSTYIKATGNSTVMDEEKDKD
MVSWLLDLKARLDAIWEESFFRNETFSNTLKDAFEHLINLRQNRPAELIAKFIDGKLRSG
NKGTSEEELEGILDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLK
TECGSQFTNKLEGMFKDIELSREINESFRQSAQARLKLPSGIEMNVHVLTTGYWPTYPPM
EVRLPRELNVYQDIFKEFYLSKHSGRRLMWQNSLGHCVLKANFPKGKKELSVSLFQTLVL
MLFNDAQSLTFHDIKDTSAIEDKELRRTLQSLACGKIRVLNKIPKGREVEDEDTFVFNED
FVAPLFRIKVNAIQLKETVEENTTTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITEL
FQQLKFPIKPADLKKRIESLIDREYLERDKANPQIYNYLA
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaaaaagagattaagcagcagtagcggaggaagcggtggcatctcgctgaat
atgatatcagctaccaagaagccaaagaaccagcagcagacatcaataccggatgggttt
gagaaaaatggaaaactggggatggctgtagaggtcaccaattctgatatgatgttaatg
aatggcgttgaggaccatcttgcatctgctgggccggcatcggcgatgactgtgagtagt
agtcctggaatcgggactacagcgaacttatcacggaagaaggccactccaccgcagcct
gcgaggaagttggtaatcaagcctttcaaagagaaaccaaagctgcctaaagacttcgaa
gaagtgacatgggccaagctcagagaagccgtaactgcaattcacttaaagcagcccgtg
aattgcagtttagaggagctatatcgggctgtagaggacctctgccttcacaagatggca
gggaatttgtacaggagactgcagcaggagtgtgaaagtcacatttcagtcaagctgcga
gaccttgtaggacgcagtcctgattctgtggtgttcctgtctcatgttgaaagttgctgg
caagatcattgcgaccaaatgcttcttatccgaagcattgcgctctatctggatcgaacc
tatgttatcccgaattcaggtgttcgatcgttgtgggatatgggtttgcaacttttccgc
cgccatctttcagcttgccctgaagttgagtccaagactgtctctggtcttctcacgctt
atcgagaaggagaggatgggagagactgtggatcggagtttactgaaacacttgctacga
atgtttagtgctctttgtatatattcagagagctttgagaggcggttcttagattgtact
gccgatttctatgcagctgaggggatacgctttatgcagcaaacagatgtgcctgattat
cttaaacatgttgagaatcgacttcatgaagagaatgagcggtgcctgctctatctggat
ggaagtactcggaaatcactggtggctactgctgagaaacaacttcttagtcgtcataca
actgcaattctggagaaggggttcagcatgttgatggatgcgaatcgtttggcagatctt
caacggatgtacatgttgtttgcacgggtgaataccttggagtccttgaagatggccctg
agcacttatatcaaggcgacgggaaatagcactgtgatggatgaagaaaaggataaggat
atggtgtcttggcttttagatctgaaggcccgacttgatgctatctgggaagagagcttc
tttaggaatgaaactttttccaacactttgaaggatgcgttcgagcatctgatcaatctg
cgtcagaatcggcctgctgagcttattgctaaattcattgatggaaagctgcgttctggc
aataagggaacctcagaagaggagctggagggcattcttgataaagtgctggtgcttttt
agattcattcagggtaaagatgtatttgaagctttctacaagaaggatcttgctaagcgc
ttgcttctaggaaagagcgcctccattgatgcagagaaatccatgatatcaaagctcaag
acggaatgtgggagtcagttcacaaacaaactggaaggaatgttcaaggacatcgagctt
tctcgagaaatcaacgagtcatttaggcagtctgctcaggcacggctaaagctcccctcc
ggaattgagatgaacgttcacgtcctcactactggctattggcctacatatccacccatg
gaggttaggcttccacgcgagctcaatgtgtatcaggacatattcaaggagttttatcta
agtaagcacagtgggcgacgtctgatgtggcaaaactctttgggtcattgtgtgctgaag
gccaacttcccaaaaggaaagaaggagctgtctgtttctcttttccagactctagtgctg
atgctcttcaacgatgcccagtctttgacttttcacgacattaaagatacttctgccatt
gaggacaaggagcttcgcagaacccttcaatcattggcgtgtggtaaaattcgtgttttg
aacaagataccaaagggcagagaagtggaagatgaagacacatttgttttcaatgaggac
tttgttgctcctctcttccgaatcaaggtcaatgcaatacaattaaaggaaactgttgag
gagaatacgactacaacagagcgagtctttcaggaccgccaatatcagatcgatgctgca
atcgtacggatcatgaaaacacgcaaggtgttaagtcacacattgttaataactgaacta
tttcagcagctgaaatttccaattaaaccagctgacttgaagaaaagaatcgagagcttg
attgaccgggagtaccttgaaagggacaaagccaatcctcagatctacaactaccttgct
tag
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integrated database retrieval system
