Physcomitrium patens (spreading earthmoss): 112289983
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Entry
112289983 CDS
T01041
Name
(RefSeq) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112289983
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppp01007
]
112289983
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppp03016
]
112289983
Enzymes [BR:
ppp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
112289983
Amino acid related enzymes [BR:
ppp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
112289983
Transfer RNA biogenesis [BR:
ppp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112289983
Prokaryotic type
Other AARSs
112289983
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
TRM10_TRM10A
Motif
Other DBs
NCBI-GeneID:
112289983
NCBI-ProteinID:
XP_024391569
UniProt:
A9SRN4
LinkDB
All DBs
Position
12:13474572..13478756
Genome browser
AA seq
619 aa
AA seq
DB search
MEGGGDDAPVVAEGVTEPLSKNALKKLEKAKKAAEEKRAKDELKKAAAAAAPKKAAKVSQ
QGEDDEDMDPTQYRNNRLRALGELKEKSKNPYPHKFQINITIPDYIAKFGSLQDGDHLED
QSFSVAGRVMSKRASGGKLMFYDLHADGMKIQVIAQLNYSSLSEEDFGKLHASIKRGDIV
GINGFPGKSKKGELSIFVRSIELLSYCLHMLPKTYGKGGKDQEDSKVPDHWHPGLSRNLD
RYVLKDQETRYRQRYLDLMLNSDIRNVFKTRSQVIRFVRRFLDERDFVEVETPMMNMIAG
GAAAKPFKTHHNDLNMDLFMRIAPELYLKELIVGGLDRVYEIGKQFRNEGIDLTHNPEFT
ACEFYWAYADYDDLMKVTEEMLSGMVKEITGSYKIQYHSNGLDQPAIEIDFTPPFRRIDM
IKGLEEFSEGKIKLPKSLELLEAPEVNQYLIEACEKFDVKCPPPQTTTRLLDKLVGHFIE
EQCVNPTFIMHHPQLMSPLAKWHRSVPGLTERFELFVNKHEVCNAYTELNDPVVQRERFA
DQVKDREKGDDEAMAIDENFCTALEYGLPPTAGWGMGIDRFTMMLTDSQNIKEVLLFPAM
KPHEDVIEPPVRAADDSAS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaggtggggatgacgcgccagtggtggctgagggggtgacggagcccttgagc
aagaatgcgttgaagaagctggagaaggcgaagaaggcggccgaggagaagcgagccaag
gatgagctgaagaaggctgctgcggctgctgcacccaaaaaggctgctaaggtttcgcag
cagggagaggatgatgaggatatggatcccacgcaatacaggaacaatagattgcgtgca
ttgggcgagctgaaggagaagtcaaagaatccttatcctcacaagttccaaattaacatc
acgattccagattatatcgcgaaattcgggtctcttcaggatggagatcacctcgaagat
cagtctttttctgttgcgggaagggtgatgagcaagagagccagtggtggcaagttgatg
ttctacgatttgcacgccgatggcatgaagattcaggtcatcgcgcaattgaattattcc
agcttgtctgaggaagactttggaaaattgcacgccagtatcaagcgtggggatatcgtt
ggaatcaatggtttcccagggaagagcaagaaaggagagttgagcatcttcgtaaggtct
atcgagttgctatcttattgtctgcacatgttacccaagacttacggcaaaggaggcaaa
gaccaggaggatagcaaggttcccgatcattggcaccccggactttccagaaacttggat
cgttatgtgttgaaggaccaggaaactcgttacagacagaggtatctagatctcatgctc
aactcggacatccggaatgttttcaagacgaggtcacaagtcattcgattcgtccgacga
tttttggatgagcgagattttgttgaggttgaaacaccaatgatgaacatgatagccgga
ggtgctgctgctaaaccattcaagacacatcacaatgatctgaacatggatctgtttatg
cgaattgctcctgaactttacctgaaagagttgattgttggaggcttggaccgtgtatac
gagattgggaagcagtttaggaacgagggcattgatctcacccacaaccccgagtttact
gcctgcgagttttattgggcttatgctgattatgatgacttgatgaaagtcacagaggaa
atgctttctggcatggtaaaagaaattactggaagctacaaaattcagtatcattcaaat
ggattggaccagcctgcaattgaaattgattttactcctcctttcaggaggatcgacatg
attaagggcctcgaggaattctcagaaggaaagattaaactcccaaagtctttggagctt
ttagaggcacctgaggttaaccagtatttaatagaagcctgtgaaaagtttgatgtcaaa
tgtcctcctcctcaaactactactcgtttgcttgacaagcttgtaggccactttattgag
gagcagtgtgtgaacccaactttcatcatgcatcatccccaactcatgagtcctcttgcc
aagtggcatcggtccgttccaggcttaacagaacggttcgaactgtttgtgaataagcat
gaggtgtgcaatgcttacacagagttgaatgacccagtggttcaacgtgaacgatttgct
gatcaagtcaaggaccgtgagaaaggagatgacgaagcaatggccattgatgaaaacttc
tgtaccgcactagagtacggtctaccaccaacggctgggtggggcatgggtatcgacaga
ttcacaatgatgctgactgactctcagaacatcaaggaagtcttgttgttcccggccatg
aagccccatgaagatgtgatcgagcctccagtgcgagctgccgatgattcggcttcgtag
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