Physcomitrium patens (spreading earthmoss): 112290034
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Entry
112290034 CDS
T01041
Name
(RefSeq) EIN3-binding F-box protein 1 isoform X1
KO
K14515
EIN3-binding F-box protein
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04016
MAPK signaling pathway - plant
ppp04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
112290034
04075 Plant hormone signal transduction
112290034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112290034
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112290034
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_At1g61320_AtMIF1
LRR_Zer-1
F-box_5
Motif
Other DBs
NCBI-GeneID:
112290034
NCBI-ProteinID:
XP_024391686
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Position
12:complement(7779548..7784166)
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AA seq
835 aa
AA seq
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MSLCVYRLGEWLRRHVLCVCGVADGLLDPELSQGWWSGCRSALGFSEDRCIGFTQMCNAD
VEAACMTAEEVSIRAFVRASQCVVRKPVDGMGTLYAQPKFSALDGAYHGFYLSKGNGEDS
PQRAEWIGDDDFGMHANAVPQILPSYRTAASVFVQSLSPKTKRRRTSSKIEDSNFLVAVS
ELDQVDRINDLPDECLQEIFGFLPKVEDRCAAASVCMRWLMLQSRMRRGDFKIQPNIVCK
GGCTRKDSCPAKNSTKPAAEKGLNIVEEFSDVTKVRFDAVPNDNILGATDEVHMWGNEVD
MVINEEPRVQRQPQWASGELSRALEGREVTDVKLALVAIGELARGGLAALKITGGPARVG
KGVTDSGLIAIGNCCAALRSLTLWGCDNITDFGLAAIGSGCRLLQKLDIMKCPMVGDRGL
QEIARGCPLLSTVSIDSCSNVGDASLKALGTWSASLTSFSVTSCSMVGSAGISAVALGCN
KLKKLKLEKVRLSNKGLIAMGENCKSVTSMKLANLGWCTEEGFIGFFEGSGLKRLKSLLI
TACPGMTDVSLEVVGKVCQDLKLCVLSQCQSVTDKGLQSFLQCCVCLDSLQLERCHAITN
GGVLTALVQGKGNLRTLNLSKCHGLWNEEKRANEVSLECLSLKTLNVTGCKNVGVEPVVK
MCLRCPLLENLDLSQMVDLNDEAIISVIEGCGEHLVSLNLTNCKNITDVVVAAIASHCGD
LERLILDGCYQVGDSGLQMLAAACPSLKELDLSGTSITDSGLRSLVISRGLWLQGLTLTG
CINLTDESLSLIEDYCPSLGALNLRNCPLLSREGLSALESQLWSCDDFVSSLQLM
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgtgtgtgtacagattgggggagtggttacggcggcatgtattgtgtgtgtgt
ggcgtcgcagacgggttgttggatccagagttatcacaggggtggtggagtggttgtcga
agtgctctggggttttcagaggataggtgtattggcttcactcaaatgtgcaacgctgat
gttgaggcagcatgcatgacggcagaggaggtttcgatcagagcttttgtgagagcttct
cagtgcgttgttcgaaaaccagttgatggaatgggcacactctacgcccagccgaagttt
agcgccctcgacggtgcctaccatgggttctacctcagcaaaggaaacggtgaagattca
ccccagcgagccgagtggataggagatgatgactttggtatgcatgccaatgcggtgccg
cagatcttaccctcttatcgaaccgcggcatcagtcttcgtacagtcactttcgcccaag
accaaaagaagacgcacatcaagtaaaatagaggactctaactttttagttgcagtttcg
gagctcgatcaagtggaccgtataaacgacttgccagatgaatgcttgcaggaaatcttt
ggtttcttacccaaggtagaagatcgatgtgctgctgcttctgtctgcatgcggtggttg
atgctacagtctcggatgcgacgaggggacttcaagattcagcctaatattgtgtgcaaa
ggagggtgcacccgaaaggattcatgtcccgccaaaaatagtacgaaaccagcggcagag
aaaggcctgaatatagtggaggagttttctgatgtaacaaaggttcgctttgatgcggtt
cccaatgataacatattgggagccacagatgaagtgcatatgtggggtaatgaagtagac
atggtgataaacgaggaaccgcgggtacagaggcagccgcaatgggcatctggtgaactt
tctcgcgctttggaaggcagagaggttaccgacgtaaagcttgctcttgtggcgattgga
gaacttgcacgtgggggtcttgcagctttgaaaatcacaggagggcctgctcgtgtcggc
aaaggtgttaccgacagcggcctcatagctataggaaactgctgtgctgcgcttcggtct
ctcaccttgtggggttgcgacaacatcacagattttggcttggcagcgattgggagtggt
tgtcggttgctgcagaaactagatataatgaagtgtccaatggttggagatcgaggtttg
caagaaatcgcgaggggttgtcctttgctttccacggtcagtatagactcgtgttccaac
gttggggatgctagtttgaaggctttgggtacgtggagtgcatcgttgacctctttttct
gtcactagctgttcaatggtaggtagtgctggcatcagcgcggttgctttggggtgcaac
aagctgaagaaattgaagctggaaaaagtgcgattgagcaacaaaggactcattgcgatg
ggagagaactgtaaatctgttacgagtatgaagctcgcaaaccttggctggtgtactgaa
gaggggtttatcgggttttttgagggatctggtttgaaacggttgaagtctctgcttata
accgcttgcccgggaatgaccgacgtatctctggaggtggttggaaaagtctgccaagat
ttgaagctgtgtgttctgtcacagtgccagtcggtcacagataaaggcttgcaatccttt
ttgcagtgctgtgtctgtctagatagtcttcagctggagagatgtcatgcaattacgaac
ggtggtgtgttgacagcccttgtccagggcaagggaaatctaagaacattgaacctttca
aagtgccacggtctctggaacgaggagaaaagagctaatgaggtgtctctcgaatgcctt
tccctgaaaactctaaacgtcacagggtgcaagaacgtaggggttgagcctgttgtgaag
atgtgtctcagatgtcctttgctggagaatttggatctgagtcaaatggtcgaccttaac
gatgaagcaatcatctctgtgatagaaggttgtggagaacaccttgtgagtctcaatctc
accaactgtaaaaacatcacagatgtggttgttgccgcaattgcttctcattgtggggat
ctcgagcgtttgatcctggatggatgctatcaggtaggagacagcggcctccagatgttg
gccgcagcttgcccttcactgaaagagctggatctgtctggaacttctataacagattct
ggtttacgatcgttggttatttcgcggggactgtggcttcagggcctcactcttactgga
tgcatcaatctgacggatgagagcctgtctttgatcgaggattactgcccttcactcgga
gcactcaacctgcgaaattgtcctcttctttctagagaggggttgagtgctctcgagtcc
cagctgtggtcttgcgatgacttcgtaagctctttgcagcttatgtga
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