Physcomitrium patens (spreading earthmoss): 112290062
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Entry
112290062 CDS
T01041
Name
(RefSeq) cyclin-dependent kinase D-2 isoform X2
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03022
Basal transcription factors
ppp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112290062
09124 Replication and repair
03420 Nucleotide excision repair
112290062
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ppp01001
]
112290062
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppp03021
]
112290062
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112290062
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112290062
Enzymes [BR:
ppp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
112290062
2.7.11.23 [RNA-polymerase]-subunit kinase
112290062
Protein kinases [BR:
ppp01001
]
Serine/threonine kinases: CMGC group
CDK family
112290062
Transcription machinery [BR:
ppp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
112290062
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
112290062
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
112290062
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
DUF8754
Motif
Other DBs
NCBI-GeneID:
112290062
NCBI-ProteinID:
XP_024391785
UniProt:
A0A7I4FB68
LinkDB
All DBs
Position
1:complement(14484361..14488126)
Genome browser
AA seq
415 aa
AA seq
DB search
MAVGEPKGANRYDKGHNLGEGTYGVVFKAVDIVTNRTVAIKKIRLGKLKEGVNVTALREI
KLLKELQDPNIIELIDVYPHKSNLHLVFEYMESDLEAVIRDRNIFLSPADYKAYMQMILK
GLAVCHKKWVLHRDLKPNNLLLGSNGQLKLADFGLARIFGSPDRKFTHQVFARWYRAPEL
LFGSKQYGPGVDVWAAACIFAELILRRPFLQGSSDIDQLGKIFAAFGTPGKAQWPDVTSL
PDYVEYQHSPPQSFRSLFPQASEDCIDLLQRMFTYDPKRRITAQQALEHRYFRTEPAPTP
CHMLRRPSKPEAQPKPIELLSPAGHIVFSPPTKTRRLQLFGGDIKTAGEANRDGQAKQQL
ELGTPIDAITIPMSIDPKTNLRPTLNRTLNRSLQVKPSGYANATLSPHSSFTSGF
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcggagaacccaagggcgcgaacagatatgacaagggtcataatctgggtgag
ggaacatacggtgtcgttttcaaggctgttgacatagtgacaaacaggacggtagcaatt
aaaaagataagattgggaaagctcaaggagggtgtgaatgtgacagccttgagggagatc
aaactattgaaagaattgcaagacccaaacatcatcgagctgatagatgtatatcctcac
aagagcaatttgcacctcgtattcgaatatatggagagtgacttagaagcagtgatccga
gatcggaacatttttctctcccctgccgactacaaggcttacatgcaaatgattcttaag
ggactagcagtttgccacaagaagtgggtccttcacagggatcttaaaccaaacaatctt
ttgcttggttccaatgggcagctaaagcttgcggactttggattagctcgcatatttggg
agtcccgaccgaaagttcacacaccaggtctttgcacgatggtatcgagcacctgaattg
ctatttggttccaaacaatatggaccaggtgtggatgtgtgggccgcagcatgtattttt
gcggaacttatcctccgtcgtccattcctccagggttctagcgatattgatcagttgggg
aagatatttgcagcatttggcactcccgggaaggcgcaatggcctgatgtgactagcctt
cctgattatgtagagtatcagcattctccaccgcagtccttccgcagtctgttcccccag
gcaagcgaggactgtattgaccttcttcagcgaatgttcacctacgacccaaagcgaaga
ataactgctcagcaagcattagagcatagatattttaggactgaaccagcaccaacgcca
tgtcacatgcttcgaaggccgtcaaagccggaagcacagccaaagcccattgagcttctg
tctccagctgggcacattgtcttttcccctcctacgaagacgcggcgtctccagctcttt
ggtggggatatcaaaacagctggtgaagcgaaccgggatgggcaggccaaacagcaactt
gaattaggaacccccattgatgccatcactatccctatgtcaatagatcccaaaacaaat
cttcgacccactctcaacaggacattaaaccgttcgctgcaagttaaaccatctggatat
gccaatgcaactttgtcaccacattcgtccttcacatcaggtttctag
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