Physcomitrium patens (spreading earthmoss): 112290580
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Entry
112290580 CDS
T01041
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppp03009
]
112290580
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
90S particles
Other 90S particles
112290580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF12
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_Vps41
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
CPSF_A
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
112290580
NCBI-ProteinID:
XP_024392748
UniProt:
A0A2K1JNC7
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Position
13:15464573..15468447
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AA seq
522 aa
AA seq
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MANVRKRTQPNARKDRGKKRKVKEVGEKRDGGSVRKPRRDEEISSEEEEERIGNEGEAFF
SEEEEEEVDLETADEKRLRIAKAYLDRTRQAAADAEDDEDDETADQRMGARDSMVADLLQ
QEQLEESGRVQRKIASRVVQPTAIPEGKAVGRRHRQSVTAICITDDDTLGFSASKDGMII
QWNIETEQSDKYQLPGDNVAPSTANGGLVQGSTIKKTDKKGSRHILSLAVSSDGRYLASG
GLDRAIHLWDIRSRQHIQAFNGHRGAVTGLAFRQGTQQLMSSSLDRTVKLWSVEDRSYID
TLYGHQSDVIAIDCLRQERILSVGRDRTLRLWKIPEESQLVFRGHNAHLESCCFITNGEF
LSGSDDGCVALWSTLKKKPVYIAHGAHGSTEKYHLSLHTDQSSSLDLANGNGNGNGHVEE
HSVSTGTRGAESWVGAVAVCRASDLAASGAGDGSIQLWALKDTNRILEPLHKLPVKGFVN
SLAFAHSGRFLLAGTGQEPRMGRWGRDPAGRNGVIMHSIELS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgtgaggaaaagaacacagcctaatgcgcggaaggacaggggcaagaagcgt
aaggtaaaggaggtcggagagaagagagatggaggctcggttaggaaacccagaagagat
gaggaaatatctagcgaggaagaggaggagcgtatcggaaatgagggggaggcgtttttt
tccgaggaggaagaagaggaagtggatttagaaacagctgatgagaagaggttgagaatt
gctaaagcttaccttgatcgcactcgacaagctgcagcggacgccgaggatgatgaagat
gacgagacggcagaccagcgtatgggagctcgtgatagcatggtcgcagatttattgcaa
caggagcagcttgaagagagtggccgtgtgcagcgtaagatagcttcaagagttgttcaa
ccaactgctatccctgaaggtaaagcagtgggccggaggcatcggcagtcagtgacggct
atttgtatcacggatgatgacacattagggttttctgcttctaaagacggaatgataatt
caatggaatatcgaaactgagcaaagtgataagtatcagttgcctggcgataatgtagcc
ccttctactgccaacggtggtctcgtacaaggaagtacaataaaaaaaactgacaagaag
ggtagtagacatatactttcgttggccgtgagttccgatggtcgatacttggcttcagga
ggtctagatcgagctatacatctttgggacattcgttcgcgccaacatattcaggctttt
aatggccacagaggtgctgtcacgggattggcatttaggcagggcacgcagcagcttatg
tcaagttccttggatcgtaccgtcaagttatggagtgtggaagaccgttcgtacattgac
actctatatggacaccaaagcgatgtgattgcaatcgattgtcttcgccaggagcgcatt
ctttccgtaggacgtgaccgcactcttagactctggaagattccggaggagtcgcaactt
gtgtttaggggtcacaatgctcaccttgaaagctgttgttttattacaaatggggagttt
ttatctggttcagatgatggttgtgtggctttatggagcacattgaagaaaaagccagtg
tacatagctcatggcgcgcatgggagtacagagaaatatcacttgagtttacatacagat
cagtccagttcattagatttggcgaacggaaatggaaatggaaacggtcatgttgaggag
cactctgtctccactgggactcgtggtgcagagtcctgggtaggagcagtagcagtatgt
agagctagtgacttagctgcgtctggagcaggggatggtagcattcaactctgggctctt
aaagatacgaaccgcattcttgaacctctccacaagttgccagtgaaagggttcgtcaat
tctttggcatttgcacatagcggccgtttcctgcttgcgggtactggtcaggaacctcga
atgggcagatggggccgggatccagctggaagaaatggagttatcatgcattctatcgag
ttatcatga
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