Physcomitrium patens (spreading earthmoss): 112290583
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Entry
112290583 CDS
T01041
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
KO
K11087
small nuclear ribonucleoprotein D1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112290583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112290583
03032 DNA replication proteins [BR:
ppp03032
]
112290583
Spliceosome [BR:
ppp03041
]
Complex A
U1 snRNP components
Sm proteins
112290583
U2 snRNP components
112290583
Complex B
U1 snRNP components
112290583
U4/U6.U5 tri-snRNP components
112290583
Complex C
U2 snRNP components
112290583
DNA replication proteins [BR:
ppp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
112290583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Gemin7
Motif
Other DBs
NCBI-GeneID:
112290583
NCBI-ProteinID:
XP_024392753
LinkDB
All DBs
Position
13:complement(15462480..15464269)
Genome browser
AA seq
114 aa
AA seq
DB search
MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKSVKLTLKGKVPVALDHLSV
RGNNIRYYILPDSLNLDTLLVDDTPRVKVKKPVAGKPVGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcagatttttgatgaaactgaacaatgagacggtatcgatagagctcaag
aatggaaccattgtgcacggtactatcacaggtgtagatatcagcatgaatacgcatttg
aagtctgtgaagctcactttgaagggaaaggttcctgtggctctcgaccatctcagtgtc
cgcggcaacaacattcgatattatatcttgcctgacagcttgaatcttgacacgcttctt
gttgacgatacaccgcgcgtgaaagtcaagaaacctgttgcaggcaaacccgttggaagg
ggaagagggcgcggtcgtggcagagggcgtggacgtgggcgatag
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