Physcomitrium patens (spreading earthmoss): 112290622
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Entry
112290622 CDS
T01041
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112290622
04121 Ubiquitin system [BR:
ppp04121
]
112290622
Enzymes [BR:
ppp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112290622
Membrane trafficking [BR:
ppp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112290622
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112290622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-HC5HC2H
zf-C3H2C3
HypA
zf-Nse
zf-HC5HC2H_2
Rad50_zn_hook
Prok-RING_1
Zn_ribbon_IFT122_C
Motif
Other DBs
NCBI-GeneID:
112290622
NCBI-ProteinID:
XP_024392863
LinkDB
All DBs
Position
13:complement(15237692..15240715)
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AA seq
449 aa
AA seq
DB search
MTSLGGTYWCHQCNQTVRPTSGDELICPTCNEGFLEEIDNAGGGGGGGRSDFQGPGGVHQ
MFGFGGGDVDLGERADAPGGVAAEFRRFQAEPRGIRFPGRMSGHPAVIQVLEVMSHMLQQ
IQPSQGGQESGEADTTGDESRARGRGGVAEDGPGEFNPMLMLQGQMQNFLGGGGNVEVFF
DNGTGIPRRLPGNFGDYFLGPGLDQLIQQLAENDPSRHGAPPASKSAVEAMPTIQISQEH
LGTDAMQCAVCKDEFELGASVRQMPCMHMYHADCILPWLAQHNSCPVCRYEMPTDEQVYD
QSRSNSTPAASTTANPNSGGNGAGVDGGGTSGGFTFWGPPASFGTFPSEQTSSGGSRDSG
SSAPTSGSGSGVQASSAPAPAPTPGSGGGIGRRMSFHLPWFRSSTHSPATAPASGSSGAG
GDGGGGGNQGSGSRRNAGDGHMEPHSELD
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctttgggtggtacatattggtgtcaccagtgcaaccagaccgtgaggccgacg
agcggggatgagttgatttgcccgacttgtaacgagggttttttggaggagatcgacaac
gctgggggcggtggtggtggtgggaggagtgattttcaggggcccggtggcgtacatcag
atgttcggatttggaggtggcgatgtagatttgggggagcgtgcagatgcgccaggcggg
gtggcggccgagttccggcggttccaggcggagccccgagggatacgatttcctgggcgg
atgagcgggcaccccgcggtgatacaggtgctggaagtgatgtcgcacatgctacagcaa
atccagccctctcagggcgggcaggagtccggtgaagcggacacgactggtgatgagtcg
cgggcgagggggcggggcggagttgctgaggacggtccgggggagttcaatccgatgttg
atgttgcaagggcaaatgcagaattttctgggtggagggggcaacgtggaggtgtttttt
gacaatgggacaggaattcctcgaaggctgcctggtaatttcggggactactttctcgga
cctggactggatcagctgatacagcagctcgcagagaacgatcccagcaggcacggggcg
cctccggcgtcgaagagtgcggtggaggcgatgccaacgatccagatatcacaggagcat
ctggggaccgatgccatgcagtgtgctgtgtgcaaagacgagtttgagctgggggcgtcg
gtgcggcagatgccgtgcatgcacatgtaccacgcggactgcatactgccttggctagca
cagcacaattcatgccctgtgtgtcggtatgagatgccgacggacgaacaggtgtacgac
cagagccggtcaaattcaacgccagctgcgagcacgaccgcgaacccgaattctggtggc
aacggtgcgggggtggacggagggggcacgtcagggggtttcacattctggggtcctccg
gcgagtttcgggacattcccgagcgagcagacgtcgagtggcggcagccgagattcagga
tccagtgcaccgacgagtgggtctgggagcggggttcaggcaagtagtgctccagcacca
gcgcctactcctgggagtggcggaggcatcgggagacggatgtcgttccacctgccgtgg
ttccggtcgtcaacacactcgccagccacggcccctgcatcaggatcgtccggagcgggt
ggagatggtggtggaggcggaaatcagggttctggaagccgaaggaatgcgggagacggg
cacatggagccacactcagagttggattga
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