Physcomitrium patens (spreading earthmoss): 112290670
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Entry
112290670 CDS
T01041
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112290670
04121 Ubiquitin system [BR:
ppp04121
]
112290670
Enzymes [BR:
ppp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112290670
Membrane trafficking [BR:
ppp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112290670
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112290670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_16
zf-HC5HC2H
Prok-RING_1
zf-Nse
zf-HC5HC2H_2
HypA
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
112290670
NCBI-ProteinID:
XP_024392985
UniProt:
A0A2K1JMH5
LinkDB
All DBs
Position
13:complement(13854816..13856966)
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AA seq
438 aa
AA seq
DB search
MTSLGNTYWCHQCNRTVRPTSRDELICPSCNDGFLEEIEHGGGGGRSHFMGFGGDQAFGF
GGRDVDSGERAEGIGGPMGGFRRYHQTDPRGTRFPVRVEHPAVLQVLEAMSAVLQQIQPP
QGGQDSSDVDTSGYGTHSRGRSGVMEDVPGGFSPLVRLQGQMHNFLGGGGNVDVFFDNGT
GNPRRLPGNFGDYFLGPGLDQLIQQLAENDPSRHGAPPASKSAVEAMPTIQISQEHLGTD
AMQCAVCKDEFELGALVRQMPCKHMYHADCILPWLAQHNSCPVCRYEMPTDDHSYNQSHS
NSIPAASTAASTNPEGNGGGGSGGFTFWGAPAAFRFPTVESSSGGSRDAAPTNGSSSVTQ
ASSAPAATAAPAPAPASGGGIGRRFSFYLPWLRSSPHSSAPAPAPGSSGAGDDGAGNQGS
GSRRSGGDGHPEPHPELD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctttgggtaacacatattggtgtcaccagtgcaaccggaccgtgaggccaaca
agcagggatgagttgatttgcccgtcttgcaacgacggttttctggaggagatcgaacat
ggcggaggcggtgggaggagtcattttatggggttcggcggtgaccaggcgttcggattc
ggaggtcgcgatgtggattcgggggagcgcgcggaggggataggtgggccgatgggtgga
ttccggcggtaccatcagacggatcctcgagggacacggtttcctgtgcgggttgagcac
cccgcggtgcttcaggtgctggaggcgatgtcggcggtgctgcagcaaatccagcctcct
cagggagggcaggattccagcgacgtggacacaagcggttatgggacgcactcaaggggg
cggagtggagttatggaggacgttccagggggtttcagtccgttggtgagattgcaaggg
cagatgcataattttctgggcggaggtggcaacgtggatgtattttttgacaatgggaca
gggaatcctcggagactgcctgggaatttcggggactactttctgggaccgggactggat
cagttgatacagcagctcgcagagaacgaccccagtaggcacggggcgcctccggcgtcg
aaaagcgctgtggaggccatgccgacgatccagatttcgcaggagcatctggggacagat
gccatgcagtgcgctgtgtgcaaggacgagtttgagctgggggcgttggtgcggcagatg
ccgtgcaagcacatgtatcatgcggattgcatactgccgtggctggcgcagcacaattca
tgccctgtatgtcggtacgagatgccgacggacgaccatagctacaaccagagccactcg
aattcaataccggctgcgagcacagctgctagcacaaatccggagggcaacggagggggc
gggtctggcgggttcaccttctggggtgcaccagcggctttcaggttcccgactgtggag
tcgtcgagcggcggcagccgagacgcagcaccgacaaatggatccagtagcgtcactcag
gcgagcagcgctccagcagcaacagcagcaccggcgccagctcctgcgagtggtggaggt
atcgggaggcgattctccttctacctgccgtggttgcggtcgtctccacactcatctgcc
ccagcgcctgcaccagggtcgtctggggcaggggacgatggagctggaaatcagggttcc
ggaagccgaaggagtgggggagacggacacccggagccgcacccggagttggactag
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