Physcomitrium patens (spreading earthmoss): 112290721
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Entry
112290721 CDS
T01041
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112290721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112290721
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112290721
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
Nup35_RRM_2
Asp4
Motif
Other DBs
NCBI-GeneID:
112290721
NCBI-ProteinID:
XP_024393112
LinkDB
All DBs
Position
13:complement(10278387..10281957)
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AA seq
456 aa
AA seq
DB search
MAHNSGEHGMNLGSRKLVVLGIPWDVDTEGLRQYMLKFGELDDVIVMKDRGTGRSRGFGY
VTFATVEDAKKTVSTQHSLNGRMLEVKVATPKEEMKPPAKKITRVFVARIPPSVTDEAFR
SYFEKYGTLTDAYMPKDQGSKAHRGIGFVTFEIPESVDRLMNETHELGGSTIAVDRATPK
EDGVKTWGRGFHGGNQNSGSNAGSGSYGAYGVYTNTARFGGLGGGFGAYDYPGSGFGSDL
GPSGGLSSAYGGGNSWPPAPSGAGYGGPGLGISGGVSGSFGSGGPPVPPLRGLGTKIFVG
RLPPEANAEDLRRYFNNFGRISDVYVPKDAKKTSHRGFGFVTFSDEGAAERVALRNHEIL
GHQIAVDRAAPQDEVANVPYMSGFGGVGSFSGGAGGPMRGGNAPLLGSGYGSLPGNLDFN
SGWGAYGGVGGLPSGLDSGLSGGHRSSRSEPRYRPY
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacaattctggcgagcatggcatgaacctcggatctcggaaactcgtggttctg
ggtatcccgtgggatgttgatacggaaggtttgaggcagtatatgctgaagtttggtgaa
ctcgatgacgtcattgttatgaaggatcgcggcacaggacgatcgcgaggatttggttac
gtgacatttgcaacagtcgaagatgccaagaaaacagtttctacgcaacattctctaaat
ggacgaatgttggaggtgaaagttgcaactccaaaggaagagatgaagccacccgcgaag
aagataacgagggttttcgtcgccagaatccctcctagtgtcaccgacgaagcttttcga
agttactttgaaaaatatgggaccttaactgatgcttacatgccaaaggatcaaggttcg
aaggcgcatagaggcattggctttgttacatttgaaattccagaatcggttgacagactc
atgaatgaaacccatgagcttggtgggtcgaccattgctgtggatcgtgctacaccgaag
gaggacggtgtgaagacttggggacgaggatttcatggaggcaaccaaaattctggatcc
aatgctggatcaggttcctacggagcttatggtgtttacacaaatacagcccggtttggt
ggcttgggaggcggatttggagcttatgactatccaggttctggttttggaagtgattta
ggtccatctggtgggctgagcagtgcttatgggggtgggaattcctggccccctgctccc
tcaggagctggctatggcggcccaggtttggggatttcagggggagtctccggcagcttt
ggttctggtggtccaccggttccgcctctgagggggttaggtacaaaaatctttgttggc
agattacctccagaagcaaatgcagaggatttaaggcgctatttcaacaatttcggaagg
atatctgatgtttatgttccaaaggatgcaaaaaaaacatcacatagaggtttcggcttt
gttactttctctgacgaaggtgcggctgaacgagttgctctcaggaatcatgagattctt
gggcatcagattgctgtagaccgtgcagcacctcaggacgaagtggcaaacgtcccatac
atgagcggctttggtggcgtgggttcattttctggaggagctgggggcccaatgagaggg
ggtaatgcgccgttactaggaagtggatacggttccttgccaggcaatctcgacttcaat
tctgggtggggtgcttatggcggtgtaggtggattaccatcaggtttggactctggactt
tcaggcggccatcgctcttctaggtcagaacctcgctacagaccatattaa
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