Physcomitrium patens (spreading earthmoss): 112290788
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Entry
112290788 CDS
T01041
Name
(RefSeq) uncharacterized protein
KO
K10895
fanconi anemia group I protein
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
112290788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112290788
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
112290788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S2
FANCI_S1
FANCI_HD1
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
112290788
NCBI-ProteinID:
XP_024393234
UniProt:
A0A2K1JMD5
LinkDB
All DBs
Position
13:12790151..12799629
Genome browser
AA seq
1520 aa
AA seq
DB search
MEFDDEIVEEVLSAGSSQLTEKQRTFAELILSRNDEVILEAFDKRCRNGNPGQAVLDYTR
ALFRFLMPLVDKDEFSRSAKLLVLVVVRVIELINDQKLCTDRKVLECLSFFAQELSSLPC
RLLPSVVEAVVSNLEIDGANDEGRSLELLPNCLSIISSSTEPVLVSGEQGDNLQISGREY
KEHIVSRFLAIPWSKRLLTRMACMVRELLLDSDQTEDFLKKIFSHMKEVEPQDLPSLVYQ
LILLASRGHKQVIIHGIMSFFSKLQSSDLQDIAQNGSKSGIDLFRQVEGTVILHINFAVK
QDPALGVEWLAVARSIQGAVSPFSVAVLLSLARIQRFEQQCFDILKAAAVRPFQDCERCR
DSLWTSSVLGTTCLRTAKDTESSFMRTVQNSAFGWDHIIPSVVQLGFIFIESGAGGRSLP
AEDVGRAERATDTQDLGLRILVAAFKVHEIARDEIIEQSKCRIIGLKSQQSTLIIRMLAE
LVQKYPLLMLDHCSRLKECLDYFTFLPSNPASSIIQALCPLFQLSLDLQDYTILVLRKSM
FSREANIRMIAAQGLLDLIIADKQARVLVNKSSESESWLRMSMSEPSSSQSSQQVPRRGM
NGRNKNLLQELLGLLRRCLSQQVSVREVLYKRLPSLLLVDPASAEEVFDLVWHHFSHFYE
EKEDDAVILKLNDCVVIRNMNLHVEEPLDHLVACVHHLLTLQPQGSPGDDSATAANTFGF
TLSEEQDKRQLSSGELLGAAFSKIRKVVQVGSLGDFQLDKTENFSLETVEGERKLEQGRL
FLGILEVLMDAAVLELNRVDKESRQNEIKQELKNYLSLFDSLYQIVNQKQHVKASKHLYK
ASSTAKAPSRRGRKPADSGAQGGNAVQARQVKFAMPRAALDKRVPFLSGSCIAYLLHTAT
DQEDYELLSFALSSCFRHLKGIARTPSDEKEAQTSLEVHGHDWKMIANPLFRIILLNKTE
IASPHSPTENPQEKPKKGRKPSEDLAEGPMLNAVRSLDVLCRIALQRGILPEILRDISLD
FNSEVYDDLLDASNIRTFGTMEGTDAKLLHYWISHHMQPLIKELLDHSQFKEIEVLAKLV
LLLGQKLPLSMMKKQAVWVTRICKETSVSNVGVALALAALALSLNVPPEDLNFARGLSSE
LLKVMGFEESQPQESSLNYPIMDSTTKNTLAGLLLQHGEKVLKDVEWLVTKIKTFKPVRR
TETRSTIAGFLAAPRRAQLEEMLYTRMEAVVLMLSDFCTLTLPGTLAEQFLKFATHLYKC
LAASTKMCIATKGFIQILPSNRFQKLAEVTCTKLTAPLYLFMAVMQRDQHENQSFSKIRR
EGRTIPNLIYYIEDYERYLIQLSRITKVNLMRHAKRSTARDFKIMDTFKKARTVVHRNSG
EAQRRAEEREPDEEREEGEQEEEERTGEQAVAGEEDDEPVNEFPPNEAGVDEEETEDNVV
EDIEPVEIGAGDGDHEENDAVVEDSDEEGIQAVPLHVSESRQHSRGSALKRRSRVVDSDE
GSDDDLPVSHKVSAKRQRSL
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgacgatgagattgttgaagaggtgttgtcagcagggtcctcccagctgacg
gaaaagcaacgtacctttgcagagcttatattatccaggaatgatgaagtaatactggaa
gcattcgataagcgttgtaggaatgggaatcctggacaagcagtgttagattacacacga
gcattatttcgtttcttgatgcctttggtagataaggacgaattttctaggtccgccaag
cttttggttttggtggttgtgcgcgtcattgagttaataaatgatcagaagctctgcaca
gacaggaaggttttggaatgtctttcattttttgcacaagagctgagctcattgccctgc
cgtcttcttccatcggtcgtggaagcagtagtgtcaaatttggagatcgatggggccaac
gatgaaggcagaagcctagagcttctcccaaattgcttgtcgataatatcatcgtcaact
gaaccggtgctcgtgtctggagaacagggcgacaaccttcaaataagtggaagagaatac
aaggaacacattgtgtctcgtttcctagctattccatggtccaaacggctgctgacgagg
atggcatgcatggtgcgggagctgctcctagattcggatcagactgaagattttctcaag
aaaattttcagtcacatgaaggaagttgagccccaagatttgccatctcttgtctatcaa
ttgatattactcgcttctcgtggccacaaacaagttataattcatggaattatgtccttc
ttcagcaagttacaatcctccgacttgcaagatattgcacaaaacgggtcaaaaagtgga
attgatctattccgtcaagtggaaggaaccgtcattcttcatatcaactttgccgttaag
caggatccggctcttggagtcgaatggcttgctgttgctcgatctattcaaggagcagtt
agtcctttttcggtggctgtattgctttctctagctcgaatccaaaggttcgagcaacaa
tgctttgatattctcaaagcggctgcggtgaggccttttcaagattgtgagaggtgcagg
gattcattgtggacatcctcagtattgggtaccacgtgtctgcggacagccaaagacacg
gaatcgtctttcatgcgtacggttcaaaacagtgcatttggatgggaccacataataccc
agtgttgtgcagctaggcttcatctttattgaatcaggagcaggtggtcgatccttgcca
gctgaggacgtaggacgtgcggaacgcgctacagatactcaggacttgggcttaaggatt
ttggtagcagcttttaaagtgcacgaaatagcacgtgacgaaatcattgaacagagtaag
tgccggataataggtctcaagtctcaacagagcactttaatcatcaggatgttggcggaa
cttgtgcaaaaatatccgttactaatgctggaccactgttcacgtctgaaagaatgtcta
gactacttcactttcttgcctagcaatccagcttcttctataattcaagctctgtgcccg
ttatttcagctcagtctagatcttcaggattacacaattcttgtattgagaaagtccatg
ttcagccgtgaagcgaatattcgcatgattgctgcacaaggactgctggatttgatcatc
gccgataaacaagctcgtgtgcttgtgaataagagttcagaatctgagtcttggttaagg
atgtcaatgagtgaaccgagctctagtcagtccagccaacaagtgccaagacgaggtatg
aatgggcgcaacaaaaaccttcttcaggaactcctcgggctgctacgacgttgtctttct
cagcaggtctctgtcagggaagttttgtataaacgacttcctagtcttctacttgtggat
cctgcatcggctgaagaagtgtttgatcttgtttggcaccactttagccacttctacgag
gaaaaagaggatgacgctgttattctgaaattaaatgactgtgtcgttatccgaaatatg
aatttgcatgtggaagagcctctcgatcatctggtggcatgtgtccatcacttactaacc
ttgcagccacaagggtcgcctggagatgattctgcaactgcagcaaacacgtttggtttc
acactctctgaagaacaagataaaagacagttatctagtggtgagttactgggtgcagct
ttttccaagattcgaaaagttgtgcaagttggttcgttaggagactttcaacttgacaaa
acagaaaacttctcgcttgagacagtggagggtgagcgaaaactggagcaagggcgtctt
ttcttgggaattttggaggtgctaatggatgcagctgtattggagctgaaccgcgtagat
aaagagtctcgtcagaatgaaatcaaacaagaacttaaaaactacctttctctgtttgat
tctctttaccaaattgttaaccagaagcagcacgtgaaagcgtctaaacatctgtacaag
gcaagctctaccgctaaggctccgagcaggagaggtcgcaagccagcagattcaggagcc
caaggtggaaacgcagtacaggctagacaagtgaaatttgcaatgcctcgagcagcacta
gacaaacgtgttccgttcttatccggttcttgcattgcataccttctccataccgccaca
gaccaggaagattatgaacttctttcgtttgctctttcgagctgtttcagacacttaaag
gggattgcgagaacgccgtcagatgaaaaagaggcccaaacatccttagaagttcacggt
catgactggaaaatgatagcgaaccctctttttaggattattctcttgaacaagaccgag
attgcatcaccacattctccaactgaaaaccctcaggagaagccgaaaaagggaagaaaa
ccatctgaggacttggcagaaggacccatgcttaatgctgtgagatctttggatgttctt
tgtaggatagcgttgcagagaggcattctgccagagatattgcgtgatataagtctggac
tttaacagtgaggtgtatgatgacctattggacgcttcaaatattcgtacttttggaacc
atggaaggaactgatgcaaaacttctacattactggatctcccatcatatgcaacctttg
attaaggagttacttgaccattcgcaattcaaagagattgaggttttggctaagctcgta
cttctgcttggtcaaaaactacccctatcgatgatgaaaaagcaggcggtatgggtaacc
cggatctgcaaagaaacgagtgtatcaaatgtaggggttgcattggctttggcagcctta
gcattatccttaaatgttcccccggaagatcttaatttcgcaagaggattgtcctcagaa
ctgcttaaggtgatgggctttgaggagagtcagccgcaagaatcatcactgaattatcca
atcatggatagtaccacaaagaatacattagctggtttgctcttgcaacatggtgagaag
gttttgaaggatgtggaatggttggtaacaaagatcaaaaccttcaaaccggtgaggcgt
accgagactagaagcactattgcaggcttcttagcagcaccgaggcgggcacaattggag
gaaatgctatacacacgcatggaggcggtagtgcttatgctttctgacttctgcactttg
actctaccagggacactggcagagcagtttttgaaatttgctacgcatttgtataagtgc
ctggcagcatctacgaaaatgtgtatcgcgaccaagggttttattcaaatactacctagc
aaccgatttcaaaagcttgctgaagtaacttgcacgaagctgacagcaccgctctacctt
tttatggctgtcatgcagcgggaccaacacgagaatcaatctttttcgaagatacgacga
gaaggaagaaccatcccgaatctaatctattacattgaggattacgagcggtatttgatt
caactgagtcgaattaccaaggtgaaccttatgcggcacgcaaaacgtagcactgcacgt
gattttaagatcatggacacatttaagaaagccaggactgtggttcacagaaacagtggg
gaagctcagcggagggctgaagaacgtgagccagatgaagagagagaagagggagaacaa
gaggaagaagagaggacgggagagcaagctgtagcaggcgaagaagacgatgaacctgta
aatgaatttcctcctaatgaggcgggggtggatgaagaagaaacagaagataatgtggta
gaagacattgagcccgtggagatcggtgcaggtgatggagatcacgaagaaaatgatgcc
gtggttgaggacagtgacgaggagggtatacaagcagtgccattgcacgtatctgaaagc
cgacagcactcaagagggtcagcacttaaacgaaggagcagagtagtggattcagatgag
ggatctgatgatgatctacctgtttcacacaaagtatctgcaaagaggcagcgcagcttg
taa
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integrated database retrieval system
