Physcomitrium patens (spreading earthmoss): 112290799
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Entry
112290799 CDS
T01041
Name
(RefSeq) polyprotein of EF-Ts, chloroplastic isoform X1
KO
K02357
elongation factor Ts
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ppp03012
]
112290799
03029 Mitochondrial biogenesis [BR:
ppp03029
]
112290799
Translation factors [BR:
ppp03012
]
Eukaryotic type
Elongation factors
112290799
Prokaryotic type
112290799
Mitochondrial biogenesis [BR:
ppp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
112290799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_TS
S1
EF-Ts_N
S1_RRP5
UBA
UBA_7
FUSC
DUF3255
Motif
Other DBs
NCBI-GeneID:
112290799
NCBI-ProteinID:
XP_024393258
LinkDB
All DBs
Position
13:15078538..15084965
Genome browser
AA seq
1037 aa
AA seq
DB search
MLMAYVALPTRNSTVLHLANAAARLPRNACSIVQSSRSLKDILPLRPLKVHSSCLSAARI
LSNLTTTDWRIFSSVEDNVTVEEPAVDATAGGSGGENIPEATAAEETESSEASAKKMQRN
STMKGRAGGKTITVQKDQIVPGAVFTGRVRFVQPYGAFVDIGAFTNGLVHVSELAPGYVK
DVSDFVKVGQEVTVTVLEMNEKSKRIALTMRDRESEAAVPSFRSGDELNAGSGTSGDGSG
KPTNQGKIAGRGNGGSRSNLKPKLRQSKAKTKLKKGEVLKGTVKNIIRNGAFIEFPEQGE
EAFLRGSEVTEGGENVPIENLLTVGQEVTVRVLKIERGKAYLTMKPQIDMTAVNDSINSG
VVGGATNPFATFFRSVNMVSRTLVPVDAQETASAAHEALTVDKIASVPETSAAEEASDVQ
EAPVIEVISAAQKAPTEEEAPAVDATSVSEGKSAVVEFSPEVSQASVESSEESSASSEAN
IEESRSLSLGELAEGIGKAVGEVENVVEAAAQRVEHVVEAAADILKIGEKADESKEAALQ
EPEASAAEEPAEVAPQEPKAGPPEESKTAATVEPKAVASAGPTSAQVKQLREKSGAGMMD
CKKALVACSNDVAKAQEYLRKKGLASAEKKAGRIAAEGRVGSYVHGGRLGVLIEINCETD
FVSRGSQFKELVMDMGMQVVACPAVQYVSTDDVPADFVAKEKEIEMSKEDLANKPVQIRE
RIVEGRVAKRLGELALLEQPFIRDDKVPVKDLVKELTAQLGEKIQIRRFVRYNLGEGLQK
KSDDFASEVAAQIAAKADLKPVTEVPKVEVAKKEEDSPKVAVSVSKVKELREMSGAGMMD
CKKALAACDNDIEKATEYLRKKGLASADKKSGRIASEGLIGSYIHDGRIGVLIEVNSETD
FVSRSDLFKELVANMGMQVAACSQVEYVTVEEIPASIVEKEKEIEASKEDLANKPEAIRS
KIVEGRVAKTLNELALLEQPFIRDDKILVKDYIKQTIATLGENIQVRRFTRFNLGEGIEK
KSTDFAAEVAAQTGAKA
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgttgatggcgtacgttgctctccctacgaggaatagtactgtgcttcacctggccaat
gctgcggcaaggcttcctcgcaatgcttgttcaatcgtgcagtcttcccgctccttgaaa
gatatcttgcccctgagacccttgaaggtgcactcttcgtgcctatctgctgcacgcatt
ctctcaaatcttaccacaacagattggagaatcttttcttctgtggaagacaatgtcaca
gtggaggaacccgctgtggacgccactgctgggggttctggaggtgagaacattcctgag
gctaccgctgccgaagaaacagagtcctccgaagcttctgccaagaaaatgcagaggaac
agcaccatgaaggggcgagctggtggaaagacgatcaccgtccagaaggatcagattgtc
ccaggcgctgttttcactggcagagttcgatttgttcaaccctacggtgcatttgttgat
attggagctttcactaatggattggtacacgtttctgaactagcgccagggtatgtgaag
gatgtgagtgactttgtaaaagtgggccaagaggttactgtgacagtgcttgagatgaat
gagaaatccaagcggatcgcattgacgatgcgggacagagaaagcgaagccgcggtgccg
tcatttcgatctggagatgagttgaatgcagggtcggggactagtggagatggcagtgga
aagccaacgaaccagggcaagattgctggaaggggaaatggaggctcgaggtcaaatttg
aagccgaagttaaggcagagtaaggcaaagacgaagctgaagaagggtgaagtactgaag
gggacagtgaagaacatcatccggaacggtgcgttcatagagttccctgagcaaggagag
gaggcgttcctgcgagggtcagaggtcacggagggtggggagaatgtaccaattgagaac
cttctgacggtgggacaagaggtgaccgtgcgagttctgaagatcgagagaggaaaagct
tacttgacgatgaaaccacaaattgacatgacggcagtgaacgactcgatcaactcgggt
gtcgtaggaggtgccacgaaccctttcgcaacatttttccgcagcgtgaacatggtttct
cgaacccttgtacctgtagatgcacaagagacagcttctgcagctcacgaagcacttact
gttgacaaaatcgctagtgttcctgaaacttctgctgctgaggaagcatccgatgtgcaa
gaagcacctgtaattgaagtgatctctgcagcccagaaagctcctacagaggaggaagcc
cctgcagttgacgctacctctgtctctgagggaaaatctgccgtcgttgaattttctcct
gaagtatctcaagcttctgtggaaagcagtgaggaatcatcagctagttctgaggcaaat
atcgaggaatctcgttcactctcacttggagagcttgctgaagggattggcaaagctgta
ggcgaagttgagaatgtggtcgaggctgctgcacagagagttgaacacgtagttgaggcc
gctgcagatattttgaaaattggagagaaagccgatgaatccaaagaagctgcacttcag
gagcctgaggcatctgcagctgaggaaccagcagaagttgcacctcaggagcccaaggct
ggaccacctgaagaatcaaaaacagctgcaactgtggaacctaaggcagttgcttctgca
ggaccaacttcagcacaagtgaagcagctacgggagaagagcggagctggaatgatggat
tgtaagaaggctcttgtggcctgcagcaatgatgtcgctaaagcacaggaatatttgagg
aagaagggtcttgcaagtgctgagaaaaaagctggtcgcattgctgctgaaggccgcgtt
ggaagttatgttcatggtggacgtctgggtgtgcttatcgagataaactgtgaaacggat
tttgtttctcgaggttctcagttcaaagaacttgtaatggacatgggcatgcaagtcgta
gcttgtccagctgttcagtatgttagtacagacgacgtaccagctgattttgtggcaaag
gagaaggagatagaaatgagcaaggaggatcttgcaaacaaaccagtccagattcgtgag
aggattgtggagggccgggtggccaagcggttgggggaacttgcactattggagcagcct
ttcattcgggatgacaaagttcccgtcaaagatcttgtgaaagaactaactgcgcaactt
ggggagaaaattcagattcgtcgtttcgtgcggtacaacttgggagagggtcttcagaaa
aagtctgatgactttgcatctgaggtagcagcgcaaatagcagccaaggctgatctaaag
ccagtcacagaagttcctaaggttgaagtggctaaaaaggaagaggatagtcccaaggta
gcggtatcagtatccaaagtgaaagagctcagggaaatgtctggggcaggaatgatggat
tgcaagaaggctctggcagcttgtgacaatgacattgaaaaagcaaccgagtatttgagg
aagaagggcttggccagcgccgataagaagtctggcaggattgcatcagaaggtcttatt
gggagctacatccacgatggacgtataggtgtcctcatcgaagtcaattctgagaccgac
tttgtttccaggagcgacctgtttaaggaacttgttgccaacatgggaatgcaagtagct
gcttgctctcaggtggagtacgtaacggttgaggaaatccccgcctcaattgttgagaaa
gagaaagagattgaagccagcaaggaggacttggccaacaagccagaggctattcgcagc
aagatagtggagggtcgcgtcgccaagactttgaatgaactggctctgttagagcaacca
ttcatcagggacgataaaattttggtaaaggactatatcaagcaaactattgctactctg
ggtgagaacatccaagtgaggcggttcaccaggttcaacttaggagagggtattgaaaag
aagagtaccgattttgctgctgaagtcgctgctcaaactggggccaaggcttaa
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integrated database retrieval system
