Physcomitrium patens (spreading earthmoss): 112290817
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Entry
112290817 CDS
T01041
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112290817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112290817
03110 Chaperones and folding catalysts [BR:
ppp03110
]
112290817
03029 Mitochondrial biogenesis [BR:
ppp03029
]
112290817
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112290817
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
112290817
Messenger RNA biogenesis [BR:
ppp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
112290817
Chaperones and folding catalysts [BR:
ppp03110
]
Heat shock proteins
HSP60 / Chaperonin
112290817
Mitochondrial biogenesis [BR:
ppp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
112290817
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112290817
Exosomal proteins of other body fluids (saliva and urine)
112290817
Exosomal proteins of breast cancer cells
112290817
Exosomal proteins of colorectal cancer cells
112290817
Exosomal proteins of bladder cancer cells
112290817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4758
Motif
Other DBs
NCBI-GeneID:
112290817
NCBI-ProteinID:
XP_024393311
LinkDB
All DBs
Position
13:4743112..4749220
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AA seq
577 aa
AA seq
DB search
MYRVAAALASRVSRGQSLVQACRLQSARKFSGKDIRFGVEARALMLQGVEQLADAVQVTM
GPKGRTVIIEQSFGSPKVTKDGVTVAKSIEFKDRLKNVGASLVKSVANSTNDVAGDGTTA
ATVLTRAIFAEGCKSVAAGMNAMDLRRGINLAVEAVVAHLKSQAKMISTSEEIAQVGTIS
ANGDREIGDLLARAMEKVGKEGVITVADGKTLFNELEVVEGMKLDRGYISPYFITNAKTQ
KVELENPVILIHEKKINSLQSILPVLELVVKDQRPLLIVAEDVESEALATLIVNKLRGGV
KVCAIKAPGFGENRKALMQDLAVITGGQLISEDLGFKLEKITPVMLGSSKKVTVSKDDTI
ILDGGGDKTIIEDRIETIREAINSATSDYDKEKLQERLAKLSGGVAVLKIGGASEVEVSE
KKDRVTDALNATKAAVEEGIVPGGGVALLYASRELDKIQTANFDQKVGVQIIQNALKMPA
YTIAQNAGVEGAVVVGKLLEQTNMSIGYDAAKAEYVDMVKAGIIDPVKVIRTSLVDAASV
ASLMTTTESVVADFNKAEDKEMMGGMGGGMGGMGGMY
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtgtggcggcagcattggcgtcccgcgtcagcaggggacaatcacttgtgcaa
gcatgtagattgcagtcagctcgcaaattctctgggaaggatatcaggttcggagttgag
gctcgagctcttatgttgcaaggtgtggagcaacttgcagatgctgtgcaagtgaccatg
ggccccaagggccggactgttatcatcgagcaatcttttggatctcctaaagtgaccaag
gatggtgttactgttgcgaaaagcattgaattcaaggacaggcttaagaacgtgggagcg
tcacttgtaaaatcggtagcaaattctaccaatgacgtcgctggagatggaaccactgct
gcaacagtgctcacacgagctatttttgctgaagggtgcaaatcagtagcagctggtatg
aacgcaatggacttgcgcaggggcatcaaccttgctgtggaagcagttgtagctcatctc
aagagccaagcgaagatgatcagcacatctgaggagattgcacaggtgggaacaatctct
gcaaatggggatcgtgaaattggtgatttactagctcgcgccatggagaaagtaggcaaa
gagggtgttattactgttgcggatggaaaaactttgttcaatgaattggaggttgttgag
ggtatgaagctcgacagaggatatatttccccttacttcattaccaatgcgaagacacag
aaagtggaactggaaaatcccgtgattttgatccacgagaaaaagatcaacagtcttcaa
tcaatccttccagtgcttgagcttgtggttaaggatcaaaggccattgttgatcgttgcc
gaagacgtagaaagcgaagctctggctactctgattgttaacaagctcagaggaggtgtt
aaggtctgtgcaatcaaggcacctggttttggtgagaacaggaaagcactcatgcaggat
cttgccgtgattacgggtggtcagctcatcagcgaagacctgggattcaaacttgagaag
attactccagtaatgcttggatctagcaaaaaggtaactgtatcaaaagatgacacgatt
atcttggatggcggaggtgacaagaccatcattgaagatcgtattgagacgatccgagag
gctatcaacagcgcaacttctgattacgacaaggaaaagttgcaagagaggttggctaaa
ttatcagggggtgttgctgtgctcaagatcggaggagcaagcgaagttgaggtgagtgaa
aagaaagatcgtgttactgatgcactgaatgctactaaagctgctgtcgaggaggggatt
gtacctggtggtggtgttgctctattgtatgcttcccgggagcttgataagattcaaacc
gcgaactttgatcagaaggttggagtgcaaatcatccagaatgccttgaagatgcccgcc
tacacaattgcacaaaacgctggtgtggaaggggctgtggttgttggaaagctgttggag
caaaccaatatgagcattggttatgatgctgctaaagccgagtatgttgacatggtgaag
gcaggaatcattgatcctgtaaaagttattaggacttcacttgttgatgctgccagtgtc
gcatcgctaatgacaacaactgaatcagtagttgctgattttaacaaagccgaggacaag
gaaatgatgggaggcatgggaggcggcatgggaggcatggggggcatgtattag
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