Physcomitrium patens (spreading earthmoss): 112290871
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Entry
112290871 CDS
T01041
Name
(RefSeq) peroxisome biogenesis factor 10 isoform X1
KO
K13346
peroxin-10
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112290871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112290871
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
112290871
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
112290871
NCBI-ProteinID:
XP_024393439
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Position
13:complement(13993064..13997254)
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AA seq
392 aa
AA seq
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MDIAESSSAASAGSGNGRSGSLPSFFFPPAAQPEVMRAAEKDEHYVASLSDAAHEAFRHA
LGTRLAVAYQNETKLAGRVLYYLLTTGAGLQTLGEEYCDISQVAVNSKLPATPARRTLLV
FYQTVLPYLTERLSARAAARGNALANAEELRGIGFTQESTSEIGGEDIVLSQRRSIIQIW
QSWSQRMSQRYNAALQQWPTILPSVKEALLLVLRAHLMLFYFEGVYYHLAKRFAGIQYIF
MGKPAQQRPRYHMLGMFLLIQLSIVGGDWLRRSVLPALATSMRSRIRDPSAVSSGRQSIA
ILDVDGTNTFKKEMKSVGDDWTLAANTGDAEGGGRRKCPLCLSPRQHPTATPCGHVFCWN
CVAEWCNEKPECPLCRSPVTHPQLVCLYHTDF
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgcggagagctcctctgctgcttcggcaggaagcggcaacggccgaagtggc
tccctgccgagcttcttctttccgccagctgcgcaaccggaagtgatgcgagctgcggag
aaagatgagcactatgttgctagcttgagcgatgctgctcatgaagcgtttcgccatgca
ctcggaacacgacttgctgtggcctatcaaaacgagacaaaacttgcaggtcgggtgcta
tattatctattaactactggcgcaggtctccagactcttggggaggaatattgcgatata
tcacaggtggcggtgaattcaaaacttccagctactccggctcgcaggacacttcttgtt
ttctaccagactgtgctgccgtatctgacagaacgtcttagtgctcgggctgctgcaaga
ggtaatgcacttgcaaatgctgaagagcttcgaggaatcggttttactcaagaatcgacg
tcagagataggtggcgaggatattgtcttgagtcaaagacggagtatcattcaaatatgg
caatcctggtctcaaagaatgagtcaacgttacaatgcagctcttcaacaatggcccact
attcttccgtccgtaaaagaagcccttctgcttgttttgagggcccatctcatgcttttc
tactttgaaggggtttattaccatttggcgaaacgttttgctggcatacaatacatattc
atgggtaaacctgcacaacagaggccaaggtatcatatgcttggtatgtttctgctaata
cagcttagcattgtaggtggagactggctgcgccgcagtgttctgcctgctctggctacg
tctatgagatctcgaataagggatccttcagcagtgtcctcaggacgacaaagtatagca
attttagatgttgatggaaccaatactttcaagaaagagatgaaatcagtgggagatgac
tggacattagctgccaataccggagatgctgagggaggtggaaggagaaaatgtccgctt
tgtcttagcccacgtcaacatcccactgcaacaccgtgtggtcatgttttctgttggaat
tgcgtggcagagtggtgcaacgagaagcctgaatgtcctctttgtcggtcgcctgtaacg
caccctcaattagtgtgtctatatcataccgacttttga
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